Phoenix dactylifera (date palm): 103713576
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Entry
103713576 CDS
T03274
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103713576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103713576
03036 Chromosome and associated proteins [BR:
pda03036
]
103713576
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103713576
Coactivators
SAGA/TFTC/STAGA complex
103713576
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103713576
STAGA complex
103713576
TFTC complex
103713576
SAGA complex
103713576
SLIK complex
103713576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
103713576
NCBI-ProteinID:
XP_038983271
UniProt:
A0A8B9A9B0
LinkDB
All DBs
Position
1:14062537..14072205
Genome browser
AA seq
544 aa
AA seq
DB search
MSIVPKETIEVIAQSIGIANLSTDVALALAPDVEYRLREIMQEAIKCMRHSKRTVLTADD
VDSALSLRNVEPLYGFASGDPLRFKRAVGHKDLFYIDDKDVDLKDVINAPLPKAPLDSGV
VAHWLAIEGVQPAIPENAPVEAIVAPSENKRSEHGKEDGLPVDIKLPVKHVLSRELQLYF
DKITELIVSRSDSILFKEALESLATDSGLHPLVPYFSYFIADEVTRSLNDLPLLFALMRV
VRSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRIADNHWELRDFAANLVASVCRRFGH
VYHNLQYRLTRTLLNAFLDPSKAMTQHYGAIQGLAALGPSVVRVLILPQLETYMQLLEPE
MQLEKQKNEMKRKEAWHVYGALLCAAGKCLYERVKLFPSLLHPPTRQFWRSNGRVATKMP
NKRKASSSHLLQQPALKKLASDGTAGSIPPISMTTSMQAAADGFPTPSESGIRPSSSTGQ
LSNESISGGSRKEKSGGKAPTPSTVLAQAWKEDLDAGHLMASLFELFGEGIFSFIQPVEM
SFFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttccaaaggagacgatcgaggtcatcgcgcagagcatcggcatcgccaac
ctctccactgatgtcgccctcgctctcgcccccgacgtcgagtaccgcctccgtgagatc
atgcaggaggcgatcaagtgtatgcgccactcgaagcggacggtcttgacggcggacgat
gtggacagcgcacttagtctgaggaacgtggagcctctttatggatttgcatctggggat
cctttgcggtttaaaagggctgtagggcataaggatctgttctacattgatgacaaagat
gtggacttaaaggatgtgatcaatgcacctctacctaaagcaccacttgattctggagta
gtggctcactggctagctattgaaggggtgcaacctgcaattcccgaaaatgctcctgtg
gaagcaattgtagccccatcagagaataaaagatctgagcacggcaaagaagatggactt
cctgttgatattaagctccctgttaaacatgtattatcaagagaacttcagctctacttt
gataaaatcacggagcttattgtaagtaggtcagattcaatcctttttaaagaagcttta
gagagtttagcaacagattcagggcttcatccgctggttccatatttttcatacttcatt
gcagatgaggtcacccggagtttaaatgatctgccccttttgtttgctctaatgcgtgtt
gtccgaagccttctccggaatccacacattcatatagagccttatttgcatcagttgatg
ccatcaatgataacatgcattgttgccaaacggttggggcataggattgcagataaccac
tgggaactaagagactttgctgcaaatttagtagcttcagtgtgcagaagatttggtcat
gtgtatcacaatcttcaatatcggttgactagaactcttctcaatgcttttctggatcca
tctaaagctatgacacaacattacggtgccattcaagggcttgctgcattgggacccagt
gtggttcgtgttctcattctaccacagctggagacgtatatgcagcttttagagccagag
atgcaactagagaagcagaagaatgagatgaagaggaaagaagcttggcatgtctatggt
gccttgctgtgcgctgctggtaaatgtctgtatgaacgggtcaagttgttcccttctttg
cttcatccaccaacacgtcaattttggaggagtaatggaagagttgcaactaaaatgcca
aataaacgcaaggcaagtagcagtcacttgctgcagcagccagccctcaaaaaacttgca
tctgatggcacagcgggttcaatccctcccatttccatgacaaccagcatgcaagcggca
gcagacgggtttccaactccaagtgagtctggcattaggccatcctcttccacagggcag
ttatccaatgagagcatctctggtggaagcagaaaggaaaagagtggtggcaaagctcca
acgccatccactgtcttggcccaagcttggaaggaggacttggatgcgggccatctcatg
gcatctctatttgagttgtttggtgaaggcattttctcattcattcagccagtagaaatg
tcattctttctgtaa
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integrated database retrieval system
