Phoenix dactylifera (date palm): 103713644
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Entry
103713644 CDS
T03274
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103713644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103713644
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103713644
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103713644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103713644
NCBI-ProteinID:
XP_008798872
UniProt:
A0A8B7CGX0
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MPSLEASKRPVQIRSVYADNLESEFALIRDAVDRYPFAAMDTEFPGVVYRPRKHPLLLSP
AERYALLKSNVDALHLIQVGLTLSDAAGELPDLGTEGAIRFVWEFNLRDFDPRCDRHSPD
SVELLRANGVDFDKNRAHGVDSRRFAELLMSSGLVCNDSAVSWVTFHSAYDFAYLIKTLT
CRKLPRTMEEFLGLVRVFFGNRVYDMKHMMKYCDSLYGGLDRVASTLQVDRAAGRCHQAG
SDSLLTWQAFRRMKELYFAKDDDERHAGILYGLEVF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctcgaggcctctaaacggccggttcagatccggtccgtgtacgccgacaac
ctcgagtcggaattcgcgctgatccgggacgcggtggaccggtatccgttcgccgccatg
gacacggagttccccggcgtggtctaccggccccggaagcacccgctcctcctctcgccc
gcggagcggtacgccctcctcaagtccaacgtggacgcgctccacctcatccaggtcggc
ctcacgctctccgacgccgccggcgagctccccgacctcggcaccgagggcgccatccgc
ttcgtctgggagttcaacttgcgcgacttcgacccccgctgcgaccgccactcgccggac
tccgtcgagctcctccgcgccaacggcgttgacttcgacaagaaccgcgcccacggcgtc
gactcccgccgcttcgccgagctcctcatgtcctccggcctcgtctgcaacgactccgcc
gtcagctgggtcaccttccacagcgcctacgacttcgcatacctcatcaaaaccctaact
tgccgcaagttgcccaggaccatggaggaattcttgggcctcgttagggttttctttgga
aatcgagtgtatgacatgaagcacatgatgaagtactgcgatagcttgtatggtgggttg
gaccgggtggcgagcacgctgcaggtcgatcgggccgccgggcggtgccaccaagccggc
tccgatagcttgctcacatggcaggcgtttcggaggatgaaggagctctactttgccaag
gatgatgacgagaggcacgccggaattctgtatggattggaagttttctaa
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