Phoenix dactylifera (date palm): 103713738
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Entry
103713738 CDS
T03274
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103713738
09123 Folding, sorting and degradation
03018 RNA degradation
103713738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103713738
03041 Spliceosome [BR:
pda03041
]
103713738
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103713738
mRNA degradation factors
5'-3' decay
Lsm complex
103713738
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103713738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103713738
NCBI-ProteinID:
XP_038986887
UniProt:
A0A8B9AMM9
LinkDB
All DBs
Position
10:7902065..7909535
Genome browser
AA seq
89 aa
AA seq
DB search
MSGGGSGGGVKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ
LKNKYGDAFIRGNNVLYISTSKRTLAEGA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcggcagcggcggcggggtaaagacgccggcggacttcctgaaatccatc
cggggacgccccgtcgtcgtcaagctcaactcgggcgtcgactacagaggtattctagct
tgtttggatggatatatgaatattgcaatggaacaaacagaagaatatgtcaacggtcaa
cttaagaacaaatatggggatgcttttatcagaggaaataatgttctctatatcagcacc
tcaaaaaggactcttgcagaaggggcatga
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integrated database retrieval system
