Phoenix dactylifera (date palm): 103714160
Help
Entry
103714160 CDS
T03274
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03030
DNA replication
pda03410
Base excision repair
pda03420
Nucleotide excision repair
pda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103714160
03410 Base excision repair
103714160
03420 Nucleotide excision repair
103714160
03430 Mismatch repair
103714160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103714160
03036 Chromosome and associated proteins [BR:
pda03036
]
103714160
03400 DNA repair and recombination proteins [BR:
pda03400
]
103714160
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103714160
DNA Replication Termination Factors
ELG1-RFC complex
103714160
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103714160
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103714160
Check point factors
HRAD17(Rad24)-RFC complex
103714160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Mg_chelatase
AAA_22
AAA_16
Rad17
Viral_helicase1
RCF1-5-like_lid
RuvB_N
AAA_11
AAA_5
nSTAND3
AAA_19
AAA_28
AAA_assoc_2
DNAX_ATPase_lid
AAA_25
AAA_24
AAA_3
AAA_30
RNA_helicase
MeaB
ABC_tran
AAA_18
IstB_IS21
NTPase_1
DNA_pol3_gamma3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
103714160
NCBI-ProteinID:
XP_008799542
UniProt:
A0A8B7CHW1
LinkDB
All DBs
Position
2:12674554..12681171
Genome browser
AA seq
332 aa
AA seq
DB search
MASSSSSSTSLYDIPWVEKYRPTKVSDVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPSCREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGHHKIVILDE
ADSMTSGAQQALRRTMEIYSNTTRFALACNISSKIIEPIQSRCALVRFSRLSDQEILGRL
MVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFCGFRFVNQENVFKVCDQPHPLH
VKNMIRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGF
AHMRICDGVGSLLQLSGLLAKLALVRETAKAP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctcctcctcctctaccagtctgtacgacatcccgtgggtcgagaagtac
cggcccacgaaagtctccgacgtcgtcggcaactccgacgccgtctcccgccttgaagtc
atcgcccgcgacggcaatatgcccaatctcattctctcgggtcctcctggcaccgggaag
accacaagcatactcgccctcgcccacgagctcttgggccccagttgccgagaggccgtt
cttgagctgaacgcatctgacgatagaggtatcgatgtcgtgaggaacaagatcaagatg
ttcgcccagaagaaagtaacactcccaccaggccaccacaagattgtaatcttagatgag
gccgacagtatgacatctggtgcacagcaagcgttgaggaggacaatggagatctactca
aacaccacacggttcgctcttgcctgcaatatatcatctaaaatcattgagccaattcag
agtagatgtgcacttgttcgcttctcaaggctgtctgatcaggagattctcggccgcctt
atggtagtggtggaagctgagaaggttccttatgtgccagaaggcctcgaggccatcatt
ttcactgctgatggtgatatgaggcaggcgttgaacaatttgcaagcgacattctgtggg
ttccggtttgtcaatcaggagaatgtattcaaggtttgtgatcagcctcaccctttgcat
gttaagaatatgatccgcaacgtgcttgaggggaagtttgatgatgcctgtgctggtctg
aagcagctctatgatttgggttattctcctactgacattatcaccactctctttcgaatt
attaaaaattatgacatggctgaatatctgaagctggaattcttgaaggaaacaggattt
gcccacatgagaatctgcgatggagtaggctcgcttcttcagctctcaggtctcttagct
aagcttgcattggtccgggaaacagcgaaagctccataa
DBGET
integrated database retrieval system
