Phoenix dactylifera (date palm): 103714228
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Entry
103714228 CDS
T03274
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103714228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103714228
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103714228
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103714228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103714228
NCBI-ProteinID:
XP_008799630
UniProt:
A0A8B7CIG0
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Position
1:complement(10579168..10580543)
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AA seq
275 aa
AA seq
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MSSILPKSETVQIREVWNDNLDAEFALIREIVDDFPYVAMDTEFPGIVARPLGNFKTSSD
FNYATLKANVDMLKLIQLGLTFSDEFGNLPTCGTGRGCVWQFNFREFDVQCDIFASDSIE
LLRQSGIDFKKNNERGIDANRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTRQNL
PDTQPGFFNLIKIFFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT
SCTFRKLKGSFFNGSTERYAGVLYGLGVENGQNTH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccatcctgccaaagagcgagaccgtccagatccgggaggtgtggaacgataac
ctcgacgcagagttcgccctgattcgcgagattgttgatgatttcccttatgttgccatg
gacaccgagttcccgggcatcgtagcccgccccctcggtaacttcaagacgagctccgac
ttcaactacgccaccctaaaggcaaacgtcgacatgctgaagctgatccagctggggctc
accttctcggacgaattcggcaacctcccgacctgcggcaccggccgcggttgtgtttgg
cagttcaactttcgggagttcgacgtgcagtgcgatatatttgcatccgactccattgag
ctccttcgccagagcggcatcgatttcaagaagaacaacgagaggggcatcgacgccaac
cgcttcggagagcttctcatgtcgtccggcattgtgctcaatgactccgtccactgggtc
acgtttcatagtggctatgatttcggatatcttctcaagctgctcacccgccagaacctt
cccgatacccagcccggtttctttaatctgattaagatctttttcccgacggtttatgac
atcaagcacctgatgaagttctgcaatagcctccatggggggctcaacaagctcgccgag
ctgctggatgttgagagggttgggatctgccaccaggccgggtcagacagcctgctcacc
tcgtgcacctttaggaagttgaaggggtcattcttcaatggctccactgagagatatgca
ggcgtgttgtatggtctgggtgttgagaatggacagaatactcattga
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