Phoenix dactylifera (date palm): 103714616
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Entry
103714616 CDS
T03274
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pda04812
]
103714616
Cytoskeleton proteins [BR:
pda04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103714616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD_LRWD1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
103714616
NCBI-ProteinID:
XP_008800146
UniProt:
A0A8B7CIU6
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Position
11:16323149..16335724
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AA seq
839 aa
AA seq
DB search
MAKRGYKLQEFIAHTSDVKCLNIGKKSSRVFVTGGEDRKVNLWAIGKPTPLLSLCGHTSA
VESVAFDSAEVLVLAGSSSGTIKLWDLEEAKIVRTLSGHRFNCTSVEFHPFGEFFASGSS
DTDLKIWDIRKKGCIHTYKGHTRGIRTIKFTPDGRWVVTGGEDNVVKLWDLTAGKLLHDF
KFHKGQIRCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPEVTGVRSMIFHPDGRT
LFCGLDVTLKVFSWEPIRCHDVVDMGWSTLGDLSVYEGKLLGCSYHESRVGVWVADISLI
GPYAVGAVSKTYDLMEPVYSNGEDHSTKLMESNIKSSTTLITGHHDWGGKPKENVLQGIK
STYASNMAPMNSTDIKRNKSTISHSTPQGFDSKSSSKASAVNSTTFRVVKATESPSNTPN
RMESGFASRAISSCSTIIGTNNSLTSRKGSMMEANAVMDAQTIANPVSMPVIVPRDGLNQ
DTPGSSRKVTADTEATTQGSILCKPTQMRKPSFLGGCSESELIASGSGPLSGMSSNLGHL
DPKLLSRTAVSHEAAEAGEGNHTRTKSIAENFEKIMSLEQPLQVYSDKHAEAPCSNSETN
SVKYVRGVAVPLGKTRSLVERWEKRERFNSGCSATISSSSDPSHRDDNSASLLKSPGKTS
ERDAMSVDDDFVPDILLQNHDVFINAVKSRLTKLQAVRHFWEQNGIKGAINAVAKLPDHS
VQVDLISILKEKIDRFTLELFSCLLPLLVGLSNSRTERHLIISLEMLLELVKIFGPVIHL
TMSASSLVGVDLQAEQRLERCSHCFNHLEMIKQLLPSLIRRGGLIARHAQELNLFLLDL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcggttacaagctccaggaattcatagcgcatacatctgatgtcaaatgt
ttaaatattggaaagaaatctagcagagtttttgttactggtggtgaagatcgcaaggtg
aatctatgggcaattggcaaaccaactccattactgagcctatgtggtcacacaagtgca
gttgaatctgtagcgtttgattcagcggaggtcttggttcttgcaggatcttctagtggt
acgattaagctttgggatttggaagaggcaaagattgtacgcactcttagcgggcacaga
ttcaattgtacctctgttgaattccatccatttggtgagttctttgcatctggttcttcg
gacaccgatctcaagatctgggatattaggaaaaagggatgcatccacacctacaagggc
cacacgcgtggaattcgaacaatcaaatttactccagatgggcggtgggttgttactggt
ggagaagataatgtagtgaagctatgggatttgactgcagggaaacttctacatgacttt
aagttccataaaggacaaatccgatgcatagattttcatcctcatgagtttttacttgca
acaggttcagctgatcgaactgtaaagttttgggacctagaaacatttgaactaataggg
tctgcagggccagaggttactggggtacgctccatgatctttcatcccgatggacgaact
ctattttgtgggttggatgtaaccttaaaggttttctcctgggagcctataagatgtcat
gatgttgttgacatggggtggtctactttgggtgatctcagtgtttatgaaggaaaactt
ttgggatgctcctatcatgaaagtcgtgttggagtttgggttgctgatatatcactaatt
ggaccatatgctgttggtgcggtgtcaaaaacatatgatcttatggagcctgtatatagt
aatggggaagatcattctaccaagctaatggaaagcaacataaaatctagtactacactg
attacaggacatcatgactggggaggtaaaccaaaagaaaatgtcctacaagggatcaag
tctacttatgcttcaaacatggctccaatgaattcaactgacatcaaaaggaataaaagc
accataagccatagtactccacaaggatttgattcgaagtcttcttccaaagcatctgct
gtgaattctaccacattcagggttgttaaagctacagagagcccttctaatactccgaac
agaatggaatcaggttttgcatcaagggcgatctcgtcatgttcaactataatcggtacg
aataattcactaacctcgaggaaaggctccatgatggaggcaaacgcagtgatggatgcc
cagacaattgctaatcctgtttccatgcctgtcattgtacctagagacggtttaaaccag
gacactcctggtagctctagaaaagtaactgcagacactgaagcaacaactcagggttcg
atactctgcaaaccaactcagatgcggaagccatcttttcttggtggttgtagtgagagc
gaattgattgcatctggatctgggcctttgagtggcatgagtagtaatttaggtcatttg
gacccaaagttactttccaggacagcggtgagccatgaagctgcagaagctggcgaagga
aaccatacaaggaccaaaagtattgcagaaaattttgaaaaaataatgtcattggagcag
ccattacaagtatacagtgacaaacatgctgaagcaccatgctcgaacagtgaaacaaat
tcagtcaaatatgtcagaggagtggctgttccacttggaaagacacgatctctagttgaa
agatgggaaaaaagagagagatttaacagcggttgctcagcaacaattagttcttcctct
gacccatcccacagagacgacaattcggcatctttgcttaaatcaccagggaaaacctct
gaaagggatgcgatgtcagtggatgatgatttcgttccagatatactattgcaaaaccat
gatgtgttcattaatgctgtaaaatctcggctaacaaagttacaggcggtgaggcacttt
tgggaacaaaatggtatcaaaggtgcaatcaatgcagtggcaaagttgcctgaccattct
gttcaggttgatcttatcagcattctcaaggagaaaattgaccgttttactcttgaactt
ttctcgtgcttgcttccacttcttgtgggtttatcgaacagcaggactgaaaggcacctt
attatctctctagaaatgctattggagcttgtgaagatctttggaccagttatccattta
acaatgtcagcatcttcactagtaggggttgatcttcaggctgagcagaggttggagcgt
tgcagtcactgcttcaaccacttggaaatgataaaacaattgctcccttcgctgattaga
agaggggggctgatagcaagacatgcccaggaattgaatctcttcttgcttgacttatga
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