Phoenix dactylifera (date palm): 103714650
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Entry
103714650 CDS
T03274
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103714650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103714650
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103714650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_HPS5
Pep3_Vps18
Tricorn_2nd
WD40_like
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_DCAF12
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
103714650
NCBI-ProteinID:
XP_008800196
UniProt:
A0A8B7CJ28
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All DBs
Position
13:complement(3414273..3433771)
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AA seq
716 aa
AA seq
DB search
MMYGEQQSGGDFPRGPPMRQPSASSTNLAPEYPHHPPPYEAHGDSFAAKRMRKLVQRRAV
DYTSTVVRYMQVRMWQRDVRDRTVLQPTPAAVLDMLPTVAYADNPSTSFAAKFVHASTNK
NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNENWMV
TGDDGGSIKYWQNNMNNVKANKSAHKESIRDLSFSRTDLKFCSCSDDTTVKVWDFARCQE
ERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQ
NGNWVLTASKDQIIKLYDIRSMKELESFRGHSKDVTALAWHPFHEEYFVSGSFDGSIFHW
LVGHETPQIEIPGAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTSRDKYSIGH
CDQNAILAGRTISGFPVPEPPQTPGPFAPGLSRNEGTIPGIGVAMPLSVPSLDGSDQGEQ
RQPIPGILPSGAPPLPPGPHPSLLASGQQQAFQQIPQQGPPQQQQQVSFSQQMVSLPLPP
PNLPQLPPQSHLPFLQHPHGPRPPPLQLPPLGSIPSSMPGSMPMPSSMAPSLPLPLPNPM
LMQGSGNQMLSPMPQGSMMGLNQMHSGPVTTSNIPPVGGFANGINIQGATNAAGLQNFPL
GGMFNRPQVGQIGPIPGLNAYQPGMMDVRVPGMALGGNMGLPPPPPPPLPHGSAPQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggggagcagcagtcgggcggggatttccctagagggccgcccatgcgtcaa
ccctcggcgtcttctactaatctcgctcccgagtacccccaccatccgcccccctacgaa
gcccatggagacagttttgccgctaaaagaatgcgaaagcttgttcaacggcgtgctgtg
gactacaccagcacagttgttcgatatatgcaggttcgtatgtggcagcgggatgtgagg
gacagaactgtgttacaacctactccagctgcagtcttggatatgttacccacagttgca
tatgctgataatccatcaacaagctttgctgcaaaatttgttcatgcctctacaaacaaa
aacagatgttcaattaatcgagtcttgtggacccctacagggcggcgtcttataaccggg
tcacaaagtggcgaatttactctttggaatggacaatcttttaactttgaaatgatcctt
caggctcatgatcatgctattaggtccatggtttggagtcacaatgagaattggatggtc
actggtgatgatgggggttcaatcaagtattggcaaaataacatgaacaatgtcaaggca
aataaatctgcccataaagaatcaatccgggacttaagtttttctagaacagatttaaaa
ttctgttcctgctctgatgacactactgttaaggtctgggattttgcaaggtgccaagag
gagagatccttaactggccatggttgggatgtcaagagtgttgattggcatccaacaaaa
tctttactggtttcaggtggcaaagacaatcttgtgaaactatgggatgcaaaaacagga
agagagctctgttcattccatggtcacaaaaatacagtactttgtgtcaaatggaatcaa
aatggcaactgggtgctgactgcttctaaagatcagataattaagctttatgatattaga
tccatgaaagagcttgaatcatttcgtggacacagcaaggatgtgactgctctggcatgg
catccatttcacgaagaatactttgtcagtgggagttttgatggatccatctttcattgg
cttgttgggcatgaaactcctcagattgaaattcctggtgcacatgataacagtgtttgg
gatctagcttggcatcccattggctatttactttgcagtggtagcaatgatcacacaaca
aagttttggtgcagaaacaggcctggagatactagtcgtgataaatatagtattggtcat
tgtgatcaaaatgctatccttgctggtcgtacaataagtggtttcccagtaccagaacct
ccacaaactccaggaccatttgctcctggattgtcgcgaaatgaaggaactattcctggt
attggagttgcaatgccactctctgttccatctcttgatgggtcagatcaaggagagcag
aggcagcctattccgggtattcttcctagtggtgcacctcctcttccaccaggtccccat
ccatcccttttggcatccgggcagcaacaagcatttcagcaaattccccagcaaggccca
cctcaacagcagcaacaagtgtcattttcacagcaaatggtttcactgccacttcctcca
ccgaacctgcctcagctaccgccgcaatcacatttgccatttcttcagcatcctcatgga
cctcgccctccgcctctgcagcttcctcctcttggatccattccctcatcaatgccaggc
tccatgcccatgccttcgtcaatggctccatcattgcccctacctttgcctaatccaatg
ctgatgcaaggttcaggaaatcagatgctctccccaatgccacaaggaagcatgatgggc
cttaatcagatgcactcagggcctgttactaccagcaatattcctcctgtgggaggtttt
gcaaatgggataaatattcagggtgcaacgaatgcagctgggctacaaaattttccgctt
ggtggcatgtttaaccggccacaagttgggcaaatagggccaattccaggattaaatgct
tatcagcctggaatgatggatgttcgggttcctggcatggctctaggaggcaatatgggg
cttccaccaccaccaccaccaccacttcctcatggatcagcaccccaatag
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