Phoenix dactylifera (date palm): 103714655
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Entry
103714655 CDS
T03274
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103714655
03036 Chromosome and associated proteins [BR:
pda03036
]
103714655
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103714655
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103714655
SLIK complex
103714655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
103714655
NCBI-ProteinID:
XP_008800203
UniProt:
A0A8B7CIX7
LinkDB
All DBs
Position
13:3276314..3325833
Genome browser
AA seq
1771 aa
AA seq
DB search
MAFFRSYGSKMESAHDLNEKATGSGAEDAYGSVGNTDADVNISDKDVDIKAEDTHQSEEE
PFDAGRQQSDTSGGNATGKPGRRTAPGPWGSNFWRDCQPMWDSKDAEYDDNRGEEYSDGN
PLEELDGQGDGGRSRRGQVDVPAEEMLSDDYYEQDGEEQSDSLHCRPLSRPGNSGSRLSP
KPSSTNKNKSKSLKSAKYDEYDDDEDYEEEDEEEEDDPDDADFEPDFSETEKGTKNKARL
LESDDFDDDDDDNDDDDDEDLDLSDEDDFIDRRRKVHRKAGYNLKSKEMKSSVHSRRKRG
KTFSDEEYSSGKVSEDDTDEDFDHRTRRSFKLREKVGGRSTMFANVNSHSSELRTSGRSV
KKISYAESEESEDNDEGRANKSQKVLQEDAEEDDGDTIERVVWYQPKGMAEEATRNNQSI
LPVVLNTMSDLEPDWDEVEFYIKWKGQSYLHCQWKSISDLHNLSGFKKVLNYMKRVSEER
KYKRALSREEAEVHDVSKEMDLDLLKQYSQVERIFADRISKVGDDVVPEYLVKWQGLSYA
EATWEKDTDIAFAQDAIDEYKAREAAMTVQGKMVDFQRKKSKASLRKLDEQPGWLKGGTL
RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLST
LSNWAKEFRKWLPEMNIVVYVGNRASREVCQRHEFYTNKKGGRQIKFNTLLTTYEVILKD
KAVLSKIRWNYLMVDEAHRLKNSEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHF
LDPVKFNNKDDFVEKYKNLNSFDEIELANLHKELRPHILRRVIKDVEKSLPPKIERILRV
EMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDN
STSDRNKVERIVLSSGKLVILDKLLVRLRETNHRVLIFSQMVRMLDILAEYLSLRGFQFQ
RLDGSTRADLRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL
QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETK
KGSSMFDKNELSAILRFGAEELFKEDKNDEESKKRLESMDIDEILERAEKVESKVADGEP
GNELLSAFKVANFCNAEDDGTFWSRLIQPEAVEQADEALAPRAARSTKSYAENNQAEKSM
KRKKRALEPREKAQKRSSKAADASVCSLPMIEGAAAQVREWSFGNLSKKDASHFVRAVKR
FGNSSQIDLIVAEVGGIIETIPPEVQIELFELLIDGCQEAVRGGNMDVKGTLLDFFGVPV
KAYEVLDRVEALQLLAKRIAHYKDPVSQFRLIMQHKSPQWSKSCGWNSVDDARLLLGIHY
HGYGNWEKIRLDPRLGLTRKIAPATLGERETFLPRAPNLDNRAGALLGKEFASANRKGSK
GSRKIAKTELENVSRTSNNRSRNATSKLPKLNLGANKDHLQRCQKVEPQVKEEGEISESE
QERYQQFKEEKWMEWCADVMEEEEQTLKRLKRLQTTSLDLPKEKVLARIRKYLQLIGRKI
DKIVQQHEVSYKQSRMTMRLWNYVSTYSNLSGEKLFEIYSKLKEEQAVMGVGPPHLNSSA
SGAADRDSDPNQCPPLNNDLRKRPRPYQFPSQPSGAFHRNHTSGKSEAWKRRRRTDMDNQ
LQTQASYQQLIMSNGNRIPEPSNSAGILGCGPVEIRRFGNENPVEHILAVFSHDGVIFQN
YNGPSMGRRSCFHQVVATMKLNLLKFFFSRK
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcaggagctacgggagcaagatggaatctgcgcatgacttgaatgagaag
gcaacgggcagtggggctgaggatgcatatggctctgtaggcaatacagatgcagatgtg
aatattagcgataaggatgttgatataaaggcagaagacactcaccagagcgaagaagag
ccatttgatgctggtagacagcagagtgatacttctggtgggaatgccactggtaagcct
ggaaggagaacagctcctggtccatggggatcaaatttctggagggactgccaaccaatg
tgggactctaaagatgcagagtatgatgataatagaggtgaggaatattctgatggtaat
cctttagaagaattagatggacagggagatggtggaagatctcgtagagggcaggttgat
gtacctgcagaagaaatgctatcagatgattattacgagcaggatggcgaggagcagagt
gactcattgcattgcagaccactaagccgtcctggcaactctggttcaagattgtcacca
aagccatcctcaacgaacaagaacaagtcaaagagtttaaagtctgcaaagtatgatgaa
tatgatgatgatgaggattatgaggaagaagatgaggaagaagaagatgatccagatgat
gctgatttcgagccagattttagtgaaacagaaaagggcacaaaaaacaaggcaagattg
ttagagagcgatgattttgatgatgatgatgatgacaacgacgacgacgatgatgaggat
ctcgatctttctgatgaagatgattttattgatcgccggcgaaaggtgcatcgtaaagct
ggatacaatctgaagtccaaagaaatgaaatcttctgtacatagtcgacgaaaaagaggg
aaaactttctcagatgaggaatattcatcaggaaaagtttcagaagatgatactgatgaa
gactttgatcatagaacaaggagatcattcaagttacgtgaaaaagttggaggtcgatca
accatgtttgcgaatgtgaattctcatagtagtgagcttcgtacatctggtaggtcagtg
aaaaaaatttcgtatgctgaaagtgaagaaagtgaagataatgatgaaggaagagcaaac
aagtcccagaaggttttgcaggaggatgctgaagaagatgatggcgatacaatcgaaagg
gtagtctggtaccagccaaaaggtatggctgaagaagctacaaggaacaaccaatcaatt
ctccctgttgtattgaacaccatgtcggacttggaacctgattgggatgaagtggagttt
tatataaaatggaaaggacagtcatatttacactgccaatggaaatcgatctctgatctt
cataatcttagtggatttaaaaaggtcttaaactacatgaaaagagtgtctgaagaaaga
aaatacaaaagggccttgtcacgtgaggaggctgaggttcatgatgtaagcaaggaaatg
gacttagacctacttaaacagtacagccaggtagaaagaatatttgcggatagaatcagt
aaagttggtgatgatgtggtacctgagtatttagtcaagtggcaagggctttcttatgct
gaagcaacctgggaaaaggacactgatattgcatttgctcaggatgcaattgatgaatac
aaggctcgtgaggctgccatgactgtgcaaggaaagatggttgacttccagcggaagaag
agcaaagctagtttgcgaaagcttgatgagcaacctggatggctgaaaggaggtacactt
cgtgattatcaactggagggcttgaattttctggttaacagctggaggaatgatacaaat
gtaattttagctgatgaaatgggtcttgggaaaactgttcagtcggtttcgatgttaggc
tttctgcagaatgctcaacaaattcatgggccttttcttgttgttgtaccactttcgaca
ttatcaaactgggctaaagaattcagaaagtggcttcctgaaatgaatattgttgtatat
gttggaaatcgtgctagcagagaggtctgtcaacggcatgaattctacacaaacaagaag
ggtggcagacaaataaaattcaatacattgttaactacatatgaagtgatattgaaggat
aaagctgtgctatctaagattaggtggaactaccttatggttgatgaggctcatagattg
aagaatagtgaagcatcactatatacaactcttttggaattcagcaccaaaaacaagctt
cttatcactggtaccccactgcagaacagtgttgaggagctatgggcccttctacatttc
cttgatcctgtaaagtttaataacaaggatgattttgttgagaaatacaagaatctaaat
tctttcgatgaaattgagcttgctaatcttcataaggaattgaggccacacattctccga
agagtcataaaggatgttgagaagtctttgcctccaaaaatcgagcgcattcttagggta
gaaatgtctcctcttcagaaacagtattacaagtggattttggagcgcaatttccacaat
ttgaataaaggggttcgggggaatcaggtttcactcttgaatattgttgttgagttgaag
aaatgctgcaatcatcctttcttgtttgaaagtgctgatcatggatatggtggagataac
agcactagtgatagaaataaagttgaacgcatagttttgagcagtgggaagttagtaatc
cttgacaaactacttgttaggctgcgggagacaaatcaccgtgttttaatattctctcag
atggttaggatgttggacatacttgcggagtatttatcacttagaggattccaatttcag
aggcttgatggtagtacaagggctgatctgcgccagcaggccatggaacatttcaatgca
cctgggagtgatgatttctgtttccttctttcaacacgtgctggtgggctgggcattaat
cttgctactgcagatactgttataatatttgactcagactggaatcctcaaaatgacttg
caggcaatgagtagagcacatcggataggacaacaagaagttgtcaacatctaccgattt
gttactagcaaaagtgtggaggaggatatcttggagcgtgctaagaaaaagatggtttta
gatcacctggttattcagaagctgaatgcagagggcaggcttgagaagaaagaaacaaag
aaaggaagttctatgtttgacaagaatgaactttctgcaatattgaggtttggagcagag
gaattgtttaaggaagataagaatgatgaagagagcaaaaaacgacttgaaagtatggac
atcgatgaaattctggagagagctgagaaagttgaatctaaggtggctgatggggagcca
ggaaatgaattgctaagtgctttcaaggttgccaatttctgcaatgctgaagatgatggg
acattttggagtcggttgatacaaccagaagctgtggaacaagctgatgaagcattagca
ccacgtgctgcaagaagtaccaagagttatgctgaaaataaccaagctgagaaaagtatg
aagcgaaaaaagagggccttagagcctcgagaaaaagctcagaagcgttcgagcaaagct
gctgatgcttcagtctgttctttgccgatgattgagggagcagctgctcaagtaagagag
tggtcttttggaaatctatcaaagaaagatgcttcgcattttgttcgagcggtcaagagg
tttggaaactcaagccagattgacttaattgtggctgaggttggtggtattattgaaaca
attcctcctgaggtccagattgagctatttgagttgttgattgatggttgtcaagaagct
gttagaggaggaaatatggatgttaagggaactctattggatttttttggtgtacctgta
aaggcatatgaagtattagatcgtgtagaagcgcttcagcttctagcaaaacgcattgca
cattacaaagatccagtttctcaatttcgtttgataatgcagcataaaagtccacagtgg
tccaaaagctgtggttggaattcagttgatgatgcaaggttgcttcttggaatacactat
catggatatggaaattgggaaaagataagattagatcctaggctgggtcttactaggaaa
attgctccagcaactcttggggaacgggaaactttcttacctcgtgcacctaacttagat
aatcgtgctggtgctcttctaggaaaggaatttgctagtgctaacagaaagggctctaaa
ggatctcgtaagattgccaagactgaattagaaaatgtatcaagaacatcaaataatcga
tcaagaaatgcaacctctaagttgcctaaactgaatcttggagcaaacaaagaccatctt
cagagatgccagaaagtagaaccccaggtcaaagaagaaggtgaaatatcagagtctgag
caagaaaggtatcagcagtttaaggaggaaaagtggatggaatggtgtgcagatgtcatg
gaggaggaagaacaaacattgaaacgtctaaaaaggttgcagactaccagtttagatctt
ccaaaggaaaaggttcttgctagaattagaaaatacctccaacttattggaagaaagatt
gacaagattgttcaacagcatgaagtatcatataagcaatcccgaatgacaatgaggttg
tggaattatgtttccacctattccaatctgagtggtgaaaagctatttgagatctattca
aaacttaaagaggagcaagctgtgatgggtgtaggacccccccatctcaatagttctgcc
tcaggcgccgctgacagagacagtgatccaaatcagtgccccccgttgaacaatgatttg
cgtaaaaggccaagaccttaccagtttccatcccaaccttcaggagcatttcataggaat
cacacctcaggaaagtcagaagcatggaaacgtcggagaagaacagacatggataaccag
ctccaaactcaggcctcttatcaacagctcatcatgagcaatgggaaccggatacctgaa
ccaagcaattctgcagggattcttggttgcggcccagtagagatcaggcgatttggcaat
gaaaacccagtagagcacatcctggccgttttctcccatgacggggtcatatttcagaac
tacaacggtccgtctatgggaaggcggagctgctttcaccaggtggttgccaccatgaag
ttaaatttactcaaattttttttctcgagaaaataa
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integrated database retrieval system
