Phoenix dactylifera (date palm): 103714711
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Entry
103714711 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103714711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103714711
03036 Chromosome and associated proteins [BR:
pda03036
]
103714711
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103714711
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103714711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103714711
NCBI-ProteinID:
XP_008800300
UniProt:
A0A8B7CJ74
LinkDB
All DBs
Position
1:40541569..40554227
Genome browser
AA seq
1010 aa
AA seq
DB search
MFGSTSSFGQSSTSPFGSQSVFGQTSSASSNPFAQKPFGSPKPFGYATGSSVFGGTSTGV
FGQPSTPAFGVSSSPAFGSSTPAFGASSTSASLGGSSVFGQKPTFGGFGSTANQTNPFGQ
QTQPTFGSNLFGSATPFGASSQPAFGATSTPAFGSTSTPAFGSTSGPAFGATPTPAFGAT
TAPAFGSTTSPAFGSTATPLFGSTGAAFGASSNPAFGSTAMPAFGTQSSTVFGSSNTPAF
GASTTPTFGSSTIPAFGASTTPSFGFGSSPSFGPSSSAFGSTPFGTTPSPFGAQSSSFGS
QTATPTFGSPSFGQASFGGQRGGSRVVAYNPTPETDGTSGTQAVGKLESISAMPTYKEKS
HDELRWEDYQLGDKGGPNPAGQPAGGTGFAAPTQPTPFGSPGTFSQPAGNPFSSSTSSNP
FGPKNATFGQTGFGSSSSSIFSSSLNASSSSPFGSTSSTTSLFGASSGSAFGSSSSPSLF
GGSSAPAFGSSSSIFGSSGAGSSPAFGSGLSFGNTQSSGLFQSTSSIGQTPSPFGQSATG
FQLSTPSSGSNLFSTPSTGFGGSLFTNSAPSILSASNPAGFGQATPSLSTVFPQTAPSQA
SGMLSFGNFGQAQPASSGNLGSTSSIFGQGTFAQPRAAAQSAMVVQPAPVTNPFGTLPAT
PQMSIGHVGSAPSIQYGISTMPVAEKPVPVRVSSLLAPRHMSQRRLKLPQRKYHPKSDGP
RVPFFRDDEEASTTPKADAFVIPRENPRALVIHPVEQRPSRSTTDKQFGQKITHTSANEN
GNPADNGHNQQQNSHPLSPTKPSQKQNGFHADHAEKESDSSPTTFSGHKAREAAVVYEHG
ADIEALVPKLHHAEYYTEPRIQEMAAKERSEPGFCCHVKDFVVGRHGYGSIMFDGETDVR
RLDLDSIIQFNNREVIAYKDEGKKPPIGQGLNKPAEVTLLNIMCINKKTGLQYTEGPKVQ
KYKEMLMKKAQEQGAEFVSYDAVRGEWKFKVKHFSSYGIRDGHFIHDAHL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctacaagttcttttgggcagtcatcaacgagcccgtttggttcacaatcg
gtgttcgggcagacaagcagtgctagcagcaatccttttgcacagaaaccctttggtagt
ccaaagccttttggttatgcgacagggagttcagtatttggtggcacatcaactggtgtc
tttggccagccttccacaccggcatttggtgtttcatcatcaccagcttttggaagttca
acacctgcttttggagcatcatcaacttctgcttcccttggtggatcctctgtgtttggg
cagaagccaacttttggaggttttggatcaactgccaaccagacaaatccatttgggcag
cagacacagcccacatttggaagcaacctttttggttcagctacaccctttggtgcatca
agccaacctgcatttggggctaccagtaccccagcttttggttcaacaagcacccctgct
tttggttctacaagtggccctgcatttggtgctacacctactccagcatttggtgccaca
actgcgccagcgtttggttctacaacatcaccagcatttggttctacagcaactccacta
tttggcagtactggagctgcatttggggcatcaagcaaccctgcatttggttccactgct
atgccagcctttggtactcaaagttccacagtgtttggatcttcaaacactccagcattt
ggtgcatccactactcccacatttggatcttctacgatacctgcttttggtgcatcaact
actccttcctttggctttggctcctcaccatcttttggtccatcatcttctgcatttggc
agcactccatttggaactactccatcaccttttggtgctcaaagctcctcgtttggttct
caaacagcaacacctacatttggtagcccgagttttggacaagcatcatttgggggccaa
cgtgggggcagtagagtagtagcttacaacccaacacctgagactgatggcactagtggt
acgcaagctgttggaaagctggaatcaatatcagctatgcctacatacaaggaaaaaagt
catgatgagttgagatgggaggactatcagcttggggataaagggggtccaaatcctgct
ggacagcctgctggagggactggttttgctgctccaacacaacctaccccatttggttct
ccgggcacatttagtcagcctgcaggaaaccccttttcttcatcaacatcttctaacccc
tttggacctaaaaatgcaacttttggacagactggttttgggtcctcgtcgtcttcaatt
tttagctcatctctcaatgcttcctcatctagcccttttggctcaacctcttctaccact
tcattatttggggcttctagtggttctgcttttggttcaagttcatctccttcacttttt
ggaggatcttctgcacctgctttcggttcttcatcctcgatttttggttcttctggagct
ggatcaagtccagcatttggttctggcctctcttttgggaacactcaatcatctggattg
ttccaatccacttcatcgattgggcaaacaccatctccttttggtcagtctgctacagga
tttcaattatctactcctagttctggatcaaatctatttagcacaccatcaactggattt
gggggaagtttgttcaccaattcagcaccatcaattctttcagcgagcaatcctgctggt
tttggtcaagcaactccttctctttcaactgtatttccacaaactgccccttctcaggcg
tctggtatgctttcttttggcaactttggtcaggcacagccagcatcttctggtaacttg
ggcagcacatcgagtatctttggtcagggcaccttcgcacaacccagagctgctgctcag
tctgctatggttgtgcaaccagcaccagttaccaatccctttgggacacttccagcaaca
cctcagatgtccattggtcatgtgggttctgcaccttcaattcagtatgggatttctact
atgcctgttgctgaaaagcctgttccagtcagagtctcgtctttattggctcctaggcac
atgtctcagagaaggcttaagttgccacaaaggaaatatcatcctaaaagtgatggtcca
agggtaccattcttcagggatgacgaagaagcgtccaccacacctaaagcagatgctttt
gttattccacgggagaatcctagagcactggttatccatccggttgaacagcggccttca
agatctactacagacaaacaatttgggcagaaaatcacacatacttcagcaaatgaaaat
gggaatccagctgacaacgggcacaaccagcaacaaaatagccatcctctgtcgccaact
aaaccttcccagaagcagaatgggtttcatgctgaccatgcagaaaaggagagtgattca
tcgcccacaaccttctctgggcacaaggcacgtgaggctgcagttgtgtatgagcatggt
gcagatattgaggctctggtgcccaagcttcatcacgctgaatattacactgagccacga
atccaggagatggctgccaaggaacgatctgagccaggcttctgctgccatgtgaaggac
tttgtggttggaaggcatgggtatggcagcataatgtttgatggagaaactgatgttaga
aggcttgaccttgattcgattatccagttcaacaaccgtgaggttattgcgtacaaggac
gagggcaagaagcctcccataggacagggtctcaacaagcctgccgaggtgacactactt
aacatcatgtgcatcaataagaagacagggctgcaatacactgaaggccccaaggttcag
aaatacaaggagatgctgatgaagaaggcccaagagcagggggctgagtttgtgtcatat
gatgcagtgagaggggagtggaaattcaaggtcaagcacttcagctcctacggcattcga
gatggccattttatacacgatgctcatctgtga
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