Phoenix dactylifera (date palm): 103714871
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Entry
103714871 CDS
T03274
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103714871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103714871
03110 Chaperones and folding catalysts [BR:
pda03110
]
103714871
03029 Mitochondrial biogenesis [BR:
pda03029
]
103714871
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103714871
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103714871
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103714871
Chaperones and folding catalysts [BR:
pda03110
]
Heat shock proteins
HSP60 / Chaperonin
103714871
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103714871
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103714871
Exosomal proteins of other body fluids (saliva and urine)
103714871
Exosomal proteins of breast cancer cells
103714871
Exosomal proteins of colorectal cancer cells
103714871
Exosomal proteins of bladder cancer cells
103714871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103714871
NCBI-ProteinID:
XP_038970853
UniProt:
A0A8B8ZHE0
LinkDB
All DBs
Position
17:9500232..9506001
Genome browser
AA seq
579 aa
AA seq
DB search
MATANAISSASMLRSPRQREGLWRRVNQGQRPRQLVVRAKAKEIAFDQTSRSSLQSGVEK
LANAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIQEVASKTND
TAGDGTSTASVLAREIINLGLLSVTSGANPVNIKKGIDKTVQGLVEELERKARPVKGRGD
IKAVASIAAGNDELVGDMIADAIDKVGPDGVLSIESSSSFETTVVVEEGMEIDRGYVSPQ
FVTNPEKLTVEFENAKVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTGEALATLV
VNKLRGILNVAAIKAPGFGERRKAILQDIAILTGAELQAKDLGLLIENTSVEQLGTARKI
TISQNSTTIIADAATKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGA
ATETELEDRKLRVEDAKNATFAAIEEGIVPGGGAALVHMSASVPAMKDKLEDPVERLGAD
IVQKALVAPAALIAHNAGVEGEVVVEKIKDSQWEVGYNAMTDKFENLVEAGVIDPAKVTR
CALQNAASVAGMVLTTQAIVVEKPKPKAPAAAPPQGLTI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaatgcgatctcctcggcatccatgctccgctcccctcgccagcgggag
ggcttgtggaggagggtgaaccaggggcagaggccgaggcagctggtggtccgcgccaag
gccaaggagatcgctttcgatcagacctccaggtcctctctccagtctggagtcgagaaa
cttgctaatgccgtcggtgtcacccttggcccccgagggaggaatgttgtgttggatgaa
tttggaaatcctaaggtggttaacgatggggttacaattgctcgcgctattgaacttgct
gatcccatggagaatgcaggtgcagccttgatacaggaggttgcaagcaagacaaatgac
acggcaggtgatggcaccagtactgcatcagttcttgctcgtgaaatcataaacttgggt
ttattaagtgttacttctggtgcaaatcctgttaatatcaagaagggaattgacaagact
gtgcaggggctagttgaggagcttgaaaggaaagctcggcctgtcaaaggacgtggtgat
attaaagctgttgcttctatcgctgccggtaatgatgagcttgtgggcgacatgattgct
gatgcaattgataaagtgggccctgatggtgttttgtctattgagtcttcgtcatcgttt
gagacaactgttgtggttgaggaaggaatggagattgacagaggttatgtttccccacaa
tttgtcacgaaccccgagaagttgactgtggaatttgaaaatgccaaagttttagtgacc
gatcaaaagatttcaacaataaaagaaattattcctttgttggagaagacaacacaattg
agagctcctctgcttataattgccgaggatgtgactggggaagctttggcaacccttgtt
gtgaacaagcttcggggtattcttaatgttgctgcgatcaaggcacctggttttggtgaa
agaaggaaggcaattcttcaagatattgcaattctgacaggtgctgagttgcaggccaaa
gatcttggcctgttgatcgagaacacatctgtggagcagcttggcacggcaagaaagatc
actatctctcagaactctacaaccatcattgcagatgcagcaacaaaagatgagatccag
gccagaattgcccagttaaagaaagagcttgcggagacagactcagtttatgattccgag
aagctggctgaaagaattgcaaaactatctggtggcgtggcagttataaaagttggtgct
gcaacagagacggagcttgaggaccgcaagctccgggttgaagatgccaagaatgctaca
tttgcagctatagaagaggggattgtacctggcggtggtgctgcgcttgttcacatgtct
gctagtgttcctgccatgaaggataagttggaagacccagttgagcgcctgggtgctgac
attgtgcagaaagcactagtagcacctgcagctttgatagctcataacgcaggagtggag
ggggaggttgtggtggagaagatcaaggacagccagtgggaggtcggttacaatgcaatg
actgacaagtttgagaatctggtagaagctggagtcattgaccctgcaaaggtgaccaga
tgtgcgctgcagaatgctgcctcggtggctggaatggtcctaacaacacaggccattgtg
gtggagaagccaaagccaaaggctcctgctgctgcaccaccccaaggccttaccatttga
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