Phoenix dactylifera (date palm): 103714878
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Entry
103714878 CDS
T03274
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103714878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103714878
03009 Ribosome biogenesis [BR:
pda03009
]
103714878
04131 Membrane trafficking [BR:
pda04131
]
103714878
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103714878
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103714878
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103714878
Membrane trafficking [BR:
pda04131
]
SNARE
SNARE associated proteins
Others
103714878
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103714878
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103714878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
NPHP3_N
AAA_14
TIP49
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
NACHT
Vps4_C
Viral_helicase1
NB-ARC
DUF815
TsaE
AAA_24
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
103714878
NCBI-ProteinID:
XP_008800539
UniProt:
A0A8B7CJF5
LinkDB
All DBs
Position
17:complement(9582818..9590022)
Genome browser
AA seq
810 aa
AA seq
DB search
MANLGEASSSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVSLHPETMEKLQLFR
GDTILLKGKKRRDTICIALADDTCEESKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGKR
VHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEY
CVVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRSHVIVIGATNRPNSVD
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAAL
CTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNV
SWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRY
QIFKACLRKSPVAKDVDLWALAKYTQGFSGADITEICQRACKYAVRENIEKDIERERRRS
ENPEAMEEDDADEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
STQSGTGAGTTGSDPFASSGAGADDDDLYG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgggcgaggcctcttcttccgattccaagggcacgaagagggattttagt
actgcgattctcgagaggaaaaaggcgccgaatcgattggtcgtggacgaggcggtcaat
gacgacaattcggtggtctcgttgcacccggagacgatggaaaagctgcagcttttccgt
ggcgatacgatcctgctgaagggcaagaaaaggagagatactatctgtatcgcacttgct
gatgatacttgtgaagagtctaagataaggatgaataaggttgttagatcaaacctcagg
gtgaggctcggtgatgttgtttctgtccatcagtgccaggatgtgaagtatgggaagcgt
gtccatatacttcccatagatgataccattgaaggtgttacaggaaacttgttcgatgca
tatttgaagccatatttcctggaggcatatcgtcctgtaaggaaaggggatcttttcctt
gtcagaggtggaatgcgaagcgttgaatttaaggttatagaaactgacccagcagaatac
tgtgttgttgctccggacacagagatcttttgtgagggggaacctgtgaaaagagaggat
gaagaaagacttaatgaggtaggatatgatgatgtgggtggtgtgcgaaagcagatggct
cagattcgagagttagttgagcttccactacgacaccctcaactgttcaagtctattggt
gtaaaaccaccaaagggtatcttgttgtatggaccccctggttctgggaagacactcata
gccagagcagttgcaaacgagactggtgcatttttcttctgtatcaatggtcctgaaatt
atgtcaaaactagctggagaaagtgaaagcaatctcaggaaggcttttgaagaagctgaa
aaaaatgcaccatcaattattttcattgatgaacttgactccattgctcctaagagggag
aaaactcatggagaagttgagagacgtattgtttctcaactcctgacattgatggatggc
ttgaaaactcgttcccatgtaatcgtcataggtgctacaaatcggcccaacagtgtcgac
ccagctctcagaagatttgggaggtttgatagggaaattgacattggtgtgccagatgaa
gttggacgtctggaagttcttcgcattcatacaaagaacatgaagcttgctgaagatgtt
gatttggaaagaattgccaaggacacacatgggtatgttggggctgatctagcagctctc
tgcacagaagctgctcttcagtgcatacgggagaaaatggacatcattgacttagaagat
gaaaccatagatgctgagatactgaactctatggctgttacaaatgaacatttcaaaact
gctcttggaaccagtaatccctctgcactccgtgaaacagttgttgaagtgcccaatgtc
agctgggatgatattggtggtcttgagaatgtcaagagggaactccaagagactgtccaa
tacccagttgagcatcctgagaagttcgaaaaatttggaatgtcaccttcgaagggagtc
ctgttctatgggcctcctggttgtgggaaaactttgttagcaaaggcaattgctaatgaa
tgccaggcaaactttatcagtgtcaagggtcctgaacttttgactatgtggtttggtgag
agtgaagcaaatgttcgagaaatctttgacaaggctcgccaatctgctccatgtgtcctc
ttctttgatgagctcgactccattgctactcagagagggagcagtgttggagatgcagga
ggtgctgctgatagggtactcaatcagctcttgacagagatggacggcatgtcagccaag
aaaactgtttttattataggggcaaccaacaggcctgacatcatagatccagcattgctc
aggccaggccgtcttgaccagttaatttatattcccctgccggatgaggcctctcgttac
cagatatttaaagcttgcctaaggaagtcccctgttgcaaaagatgtggacctttgggct
cttgctaagtacacacaaggctttagtggagcagatattacagagatttgccaacgtgct
tgcaagtatgcagtcagagaaaacattgagaaggatatcgagagggagaggaggaggagc
gaaaatccagaggctatggaggaagatgatgctgatgaagttgcagagatcaaagctgct
cactttgaagagtcaatgaagtttgcccggaggagtgtcagtgatgccgatatccggaaa
taccaggcttttgcacaaactttgcagcaatcaaggggctttggaagtgaattccgcttc
tcaactcagtcaggcactggagctgggactactggatccgatccgtttgcttcgtcaggt
gctggagccgatgatgatgacctatacggttaa
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