Phoenix dactylifera (date palm): 103715102
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Entry
103715102 CDS
T03274
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103715102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103715102
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103715102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
103715102
NCBI-ProteinID:
XP_008800851
UniProt:
A0A8B7CK05
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MEIQTSGKPIDTLVEKVLSMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKTLWTWCEPYIK
DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPILRQIVSNLEKMKLPTKTSG
ATGESTRHGSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTVHERSDSEDL
RRSSPSNRRSHSRERPERDHSDRDRDRDRDRDRDRDRYRNRERDRRHEYDRHGDHDSRDR
DSLRSRYSERDSGRRDHERSVRDTDRHRHSSSRRSRSRSRSRSRSRSRSRSVQIRGANSD
HRPSPLRDGSKEKTASVSSNLAKLKDLYGDGSDKQSEGTERLRRDTGTEEVIRLGGSSWR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagatacaaacttctgggaaacctattgataccttggtagagaaggtgctcagcatg
aatatcctttcttctgattatttcaaagagctttacagattgaagacttaccatgaagtt
atagatgaaatctataatcaagttgatcatgtggaaccatggatgactggcaactgtaga
ggtccttccacagcattttgtcttctctataaattttttaccatgaaactcactgtcaaa
caaatgcatggactactgaaacaccctgattctccatatattagggctattggcttcctc
tacttgcgatatgtggcagatccaaagacattgtggacttggtgtgaaccctacatcaaa
gatgatgaggaattctctcctgggtctaatggtcggatgacaaccatgggggtatatgta
cgtgatcttcttcttggacagtactactttgatactcttttcccccgtgtgcctgtccca
atcctgcgccaaattgtctccaatctggagaagatgaagctccccaccaagacctctggg
gctactggagagtccactcgtcatggctcagatgatactgctcgtcgccctccttctgtg
aaagcttctttgtcagtctcttttggtcagcgtgctccacatcgtgcatccaccagggac
tcatccccagtccgaaggaccttaccaactgtgcacgaaagaagcgacagcgaggacctt
cgaagatcatcccctagtaatcgtcgcagtcacagtcgtgaaagacctgaacgagatcat
tcagatcgggaccgggaccgagaccgagatcgggaccgagaccgggaccggtatcggaac
cgggaacgagataggaggcatgaatatgatcgacatggtgatcatgacagtagagatagg
gactctctccggtccagatattcagagagggatagtgggaggcgggatcatgaaaggagt
gtgcgggacactgaccgacacagacattcgagctctcgtcggagtagaagcaggagcagg
agccgaagtcggagcaggagcaggagccggagtgtgcaaatccgtggtgcaaactctgac
catcgccctagtccattgagagatggaagcaaagagaagacagctagtgtttcaagcaat
ctggcaaagctgaaggatttatatggtgatggtagtgacaagcaaagtgaaggtactgaa
aggcttcgtagggatacaggcactgaagaggtgatcagattgggggggtcttcttggagg
taa
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