Phoenix dactylifera (date palm): 103715230
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Entry
103715230 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103715230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103715230
03036 Chromosome and associated proteins [BR:
pda03036
]
103715230
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103715230
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103715230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
103715230
NCBI-ProteinID:
XP_008801016
UniProt:
A0A8B7CKD2
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MMSSASSLLPTGVLSQPYDSIGNNPFGTHSESVLDVGNCDSINSVQYKKRRMSDSVEVAV
SLPTLHSSEYFIRPSIDELAASELVDSGYCSRVPNVVVGRVGYGHIKLFGYTDVRGLNLD
HIIKFDRHSVVVYENEIDKPEVGHGLNKAAEVTLILQLRSSGSKGLESERLITKLQKSAD
RQGAHFLSFNSVNSEWKFLVPHFSRFGLDEDEEDDMVVDDVDAQPAAEIKEPQVHSDGLV
LSHSLPAHLGLDPVKMQEMRMLMFSVEEEDEEFDGSFPHEKRYNSKEYMKTGSPSSSAKS
FNNRTPLQGSSRKTDSKVSPHTVRKAPQALLEYNINSSELSPSRNILMTGQNKGMQLRLT
KIEGFKLEEKHPTPLSGGYSKNIVDAALFMGRSFRVGWGPNGVLVHSGTPVGSSRSGLSS
VISVQKVAIDRAVRDENNKVKEELVDLCFSTLLDLHKSLDHEATDVDLGSCKIKLLKVVC
NRITLSEICRAYIGIVEKQLEVTGLSTSSRVLLMHQVAIWELIKVLFSERETSGNSKPLI
DDDGEEMLVDMKDSSVDIDIEARPFVRRAEFSYWLQDSVCHRVQEEVSCLNDSSYLEHIL
LLLTGRQLDAAVELAASRGDVRLSILLSQAGGSIVNRSDMAQQLDLWRMNGLDFEYIEND
RLRLYELLAGNIQGALQGSSVDWKRYLGLVMWYQLPPDTSLPIIIHTYQQLLDKGRAPHP
VPAYIDEGPLEEAVDWSVGDRYDIAYYLMLLHANEDKTFSPLKTMFSALSSTHDPLDYHM
IWHQRAILEAIGAFSSNDLHILDMSLVSQLLCLGQCHWAIYVVIHMPYDDNFPYIQANLI
KEILLQYCETWSTQEIQRQFIEDLGIPSEWMHEALAIYFQYIGDLPKALEHFLKSSDWQK
AHSIFMTSVAHYLFLSSKHSEIWRITSSMEDHKSEIADWDVGAGIYIDFYVIISSLQEEN
IMSELDPLEKKKEACQNFFSRLNGSLLVWGSRIPVDARATYSKMSEELCNLLVSTPGESS
TPSVHMSCFKTMLGAPIPEDLRCSHLQNALSVFTYLLSESET
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtccgcctcctcactcctgcccacgggggttttgagccagccttatgacagc
ataggcaataatccatttggtactcatagtgaaagtgtgttagacgtgggcaattgtgat
tccataaattcagttcagtataagaaaagaagaatgtcggacagtgtggaggtggcagtt
tctttacccactttgcattcttctgaatattttataagaccctcaattgacgagctggcg
gccagtgaacttgttgattctggttactgcagcagagttccaaacgttgtggttggaaga
gtcggttatggacatattaaattgtttggttatactgatgttagaggattgaatctggat
catatcatcaagtttgataggcattccgtggtggtgtatgaaaatgagatcgacaagcct
gaagtgggccatggtctcaacaaagctgctgaggtgaccctgatccttcagttgagatct
tcgggttcaaagggcttggaatctgagagacttattaccaaattgcagaaaagtgccgac
agacagggagcccactttctttcatttaactcggttaacagtgagtggaaatttctagtc
cctcatttcagtagatttggattggacgaagatgaagaagatgatatggtcgtagatgat
gttgatgctcaaccggctgctgagataaaagaacctcaagtgcattctgatggactggtt
ttatcccattcacttccagctcatcttgggcttgatcctgtgaagatgcaagaaatgagg
atgttgatgttttctgtagaagaggaagatgaagaatttgatggttcctttccacatgag
aagagatataatagcaaggagtatatgaagacaggttcaccaagctccagtgccaaaagt
tttaataacagaactcctttacaaggttcttcacggaagacagatagtaaagttagtcct
catactgtgcgaaaagcaccacaagctttacttgaatacaacataaatagttctgagtta
agcccatctagaaacattcttatgactgggcaaaacaagggtatgcaactgaggctgaca
aaaattgaaggctttaaattggaggagaagcatccaactccattatctggaggatattct
aaaaacattgttgatgctgcgctttttatgggaagatcatttcgtgttggatggggacca
aacggcgtccttgttcatagtggtacgccggtgggcagttctagaagtggattgtcttct
gtaattagtgtacagaaagttgcaatagacagggctgtgagagatgaaaacaataaagtc
aaggaagagcttgtcgatttgtgtttttctaccctgctggatctacacaagtctctagac
catgaagccaccgacgtggaccttggttcttgtaaaataaagcttctgaaggttgtatgc
aatcgaataacactctcagagatatgccgggcttatattggaatagttgagaaacagcta
gaggttactggtttatctacatcttctcgtgtgcttttaatgcatcaagtcgcaatttgg
gaattgataaaagttctgttctcagagagggaaacaagcgggaactctaaacctctaatt
gatgatgatggtgaggaaatgttggttgatatgaaggatagttctgttgacatagacatt
gaggcaagaccttttgttcgccgagcagagttcagttattggctgcaagatagtgtttgc
caccgggtacaagaagaagtgagctgtctaaatgattcaagttatttggaacacatactt
ctgcttttgacaggacggcagctggatgcagcagtggaacttgctgcttctagaggagat
gtacggctgtctatactgttgagtcaggctggcggatcaatagtgaatcggtctgacatg
gctcaacaactggatctctggaggatgaatgggttggactttgagtatattgagaatgac
aggttaaggttgtacgaattgcttgcaggtaatatccaaggtgctcttcagggttcatca
gttgattggaaaaggtacctgggattggtgatgtggtatcaactacccccagatacttcg
ttacctataataattcacacttatcagcagcttcttgacaaaggaagggctccacatcct
gtcccagcttatattgatgaaggacctcttgaagaagcagtggactggagtgtaggtgat
cgttatgatatagcatattatctcatgctgcttcatgctaatgaagacaaaaccttcagt
ccactgaaaaccatgttcagtgccctttcttctacacatgatccacttgactaccacatg
atttggcatcaacgtgccatattggaagctattggtgcattcagttctaatgatcttcac
attcttgacatgagccttgtttcccaattgctatgtcttgggcagtgccattgggccatc
tatgttgttatccacatgccttatgatgataatttcccctatatccaggccaatcttatt
aaggaaattttgttacaatattgtgaaacttggagtacacaggaaattcagcgccaattt
attgaagatcttggcataccatcagaatggatgcatgaggctttggcaatatattttcaa
tacattggagatcttccaaaggcccttgaacattttcttaagtcatctgactggcagaaa
gctcattcaattttcatgacatcagttgctcattacttatttttatcatctaaacattca
gagatttggaggatcacaagctcgatggaagaccacaagtcagaaattgctgactgggac
gtgggtgctggaatttatattgatttctacgttataataagttctttgcaagaagagaac
atcatgagtgaattggatccccttgagaagaaaaaggaagcatgccaaaatttcttcagt
cgcttaaatggctcgctcttagtttgggggagtagaatacccgtcgacgcgagggccacc
tattcaaagatgtcagaagagctatgcaatctgcttgtgtccactcctggtgagagctcc
actccatcggttcatatgagctgcttcaagacaatgctcggtgctcctattccagaagac
ctacggtgtagtcatctgcagaatgctctttcagtttttacctacttactctcggagtct
gagacatga
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integrated database retrieval system
