Phoenix dactylifera (date palm): 103715429
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Entry
103715429 CDS
T03274
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03020
RNA polymerase
pda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103715429
09124 Replication and repair
03420 Nucleotide excision repair
103715429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103715429
03400 DNA repair and recombination proteins [BR:
pda03400
]
103715429
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103715429
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103715429
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103715429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
103715429
NCBI-ProteinID:
XP_008801262
UniProt:
A0A8B7CKR1
LinkDB
All DBs
Position
2:2622513..2637237
Genome browser
AA seq
1187 aa
AA seq
DB search
MEDYAMMENENEEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAN
IEIRPESQHNPGRQSDFVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSA
PLYVDVTKKVIKKGHDCEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFV
RMLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMME
LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCET
KKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYV
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLS
HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHP
ILEFLEEWGTENFEEISPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEV
GVVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGF
IEYIDTEEEETTMIAMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENT
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHS
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
QMRGFETMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC
KNKTDIVQVHIPYACKLLFQELMAMAIAPRMFSKEVKAAKDQKKRGA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggaggactacgcgatgatggagaacgagaacgaggaggacgaggagatcacccaggag
gatgcgtgggcggtgatcagcgcctacttcgaggagaaggggctggtgcggcagcagctc
gactccttcgatgaattcatccagaacaccatgcaggagatcgtcgatgagtcggccaac
atcgagatccgacctgaatcccaacacaatcccggccgccagtccgactttgtcgagaca
atatacaaaatcagctttggccaaatatatttgagcaggcctatgatgacagagtcagat
ggagaaactgcgacattattcccaaaagctgcaagactgaggaatctgacatactcggcc
ccattatatgttgatgtcacgaagaaagttataaagaaagggcatgactgtgaggaagtg
actgagacacaggaatttcccaaagtttttattgggaaggttcccattatgttacggtct
agctattgcacattgtatcagaattctgaaaaagatctaacagaacttggagaatgccct
tatgaccaaggtggatactttataattaatgggagcgaaaaagttctgattgcacaggag
aagatgagcaccaatcacgtttatgtctttaagaaaaggcagcccaataaatatgcttat
gttgctgaagtccgatctatgccagagtcccaaagcaggccagcaagcaccatgtttgtg
cgcatgctttcccgtaccagtgccaaagggggttcttcaggacagtatattcgtgctact
cttccatacatacgagccgatattccaataattattgtatttcgagcgctaggttttgtt
gccgacaaagatattttagaacatatctgctatgacttcagtgatacacaaatgatggaa
ttgctgcgaccatctttggaagaagcatttgttattcaaaatcaacaggtggctctggac
tacatagggaagcgaggggcaactgttggtgtcacgagggagaagaggatcaagtatgct
aaagaaattcttcaaaaagaaatgttgcctcatgttggtgttggagaattttgtgaaact
aagaaagcatactattttggttacattattcatcggctgttgctgtgtgcacttggacga
agaccagaagatgatagggatcattatggcaacaaaaggctggaccttgctggtcctcta
cttggaggcttgttcagaatgctttttagaaaattgaccagggatgtgagatcatatgtc
caaaagtgcgtggataatggaaaagatgtcaatttgcaattcgcgatcaaagctaaaacc
atcacgagtggccttaaatattcccttgctactggaaattggggacaagcaaatcaagct
ggcgctagagcaggggtttcacaggttttgaatcgcctaacatatgcttctactctctct
cacttgcggaggttgaactctcctataggacgtgaagggaagttggctaaacctcgacag
ttgcacaattctcattggggaatgatgtgtcctgctgaaacacctgaaggacaggcttgt
ggattggtgaaaaatctcgctttgatggtgtacattactgtaggatcggctgcacatcct
attttagaatttctagaggagtggggtactgagaactttgaggaaatatcacctgcagtt
attcctcaagcatccaaaatttttgtcaatggttcctgggtgggtattcatcggaaccct
gacctcttggtgaggaccttaagacggttgaggagacagattgatgtcaacacggaggtt
ggagttgtacgagatattcgtctcaaagaactacggctttatactgactatggccgctgt
agtcgtccactgtttattgtagagaaccaaaggctgctgataaagaaaaggcatattcaa
gcactgcaacaaagggaatctccagaggaaggttggcatgatcttgttgcgaaaggattt
atagagtacattgatactgaggaagaagaaactacaatgatagccatgactatcaatgat
cttgtaaatgcaagacagaacccagaggaggcatactctgaaacttacactcactgtgag
atccatccatcattaattttgggtgtttgtgcatctatcattcctttccctgaccacaac
cagtcacctcgtaatacataccagtcagcaatgggaaagcaagccatggggatttatgta
accaattaccaattacgaatggatacattggcctatgttctctactatcctcaaaagcct
ctcgttacaactcgtgccatggaacatttgcactttagacaattgcctgctggcattaat
gcaattgttgcaattgcctgctattcgggatataaccaagaagattctgttatcatgaac
caatcttcaatagatcgtggattctttcgatccttgtttttccgttcttacagagatgag
gaaaagaagatgggaactcttgttaaagaggactttgggcgcccaaatagggaaaataca
atgggtatgcgacatggctcttatgacaaattggatgatgatggtcttgcacctccgggt
acaagggtctctggtgaagatgtcataattggaaagacatctccaatccctcaagatgat
tctcaaggtcaagcttcaagatacacacgacgtgatcatagtaccagtgtacgacacagt
gaaagtgggatggtggatcaggtcctattgacgacaaatgctgatggtttgagatttgtg
aaagtaagaatgaggtcagttcgtattcctcaaattggtgataaatttagtagcaggcat
ggccaaaagggaactgttggaatgacgtacacacaagaagacatgccatggactgtggaa
ggcatcacacctgacattattgtgaatccacatgccattccttctcgaatgacaataggt
caacttattgagtgcatcatgggaaaggttgctgcccatatgggaaaggagggagatgct
accccttttactgatgtcacagtggacaatatcagcaaagctcttcataagtgtggatat
cagatgcgtgggtttgaaactatgtataatggccacactgggcggaagttgactgccatg
atattcataggacctacttattaccagagactgaagcacatggttgatgacaagatccac
tctcgagggcgtggacctgtgcaaattcttacaaggcagccagcagaaggacgctctcgt
gatggaggtctccgctttggtgagatggagcgagattgcatgattgcacatggggctgcg
catttcctgaaggaaagattatttgaccaaagcgatgcttatagggttcatgtttgtgag
agatgtggacttattgctattgccaacctcaagaagaattcctttgagtgcagaggttgc
aagaacaagactgacattgttcaggtgcatataccttacgcttgtaagctgcttttccaa
gagctcatggccatggcaattgctcccagaatgttctcaaaagaagtgaaagcagccaaa
gaccaaaagaagagaggcgcctaa
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integrated database retrieval system
