Phoenix dactylifera (date palm): 103715534
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Entry
103715534 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103715534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103715534
03036 Chromosome and associated proteins [BR:
pda03036
]
103715534
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103715534
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103715534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
103715534
NCBI-ProteinID:
XP_008801415
UniProt:
A0A8B8J8X6
LinkDB
All DBs
Position
7:complement(973620..998831)
Genome browser
AA seq
1516 aa
AA seq
DB search
MAAASRSLAGMEVPIAGSEKVRWIDLIVPSSSSMPSPPQLPSSQPSAPTAFRNAASCHVI
PGDPPAYLIWRLHKNLPNVLEVVELFPHKEFPETGLHLVFQDALCPFAFLCKNEIQSGAG
NGYLLYALTVSGVAYLFNLRSPLSYISGSTFPQNELVEFNVQTHVQIGNITAVTAAPGCI
VIGRQDGSIGCYQLGILDPSAPGFMNELRDDVGIGRLWNLVSRGKVIGAVQDMVISGICG
RKLLFVLHLDGILRVWDLVSRMKIISDNVSSSELEGSNPSRLCVGDANHDTNLICLAILH
EGILVSDRKMVALHHFGFSAGEKVLLSPEPAMQNIHLEEGKLIDWKLHSSKLWILKDDGS
MLYDLSYFDYNVEHTGTYNLQEDFVADQLFQSSEHALDDLIWTNSSIFSSIKDRTAYFIS
SIFLRRLLQPGVYHSSALRATILEHKKYLSDHEFKSLTVAGLKKEIFTIIEGEGATLNSS
SAVYHWKSFCSCFFGHWCQNSMPYGLLLDSSNDVIGLIRKSSISLFRSLEGAEHIIYGSS
DEFQNLKCSGMILPDSDIDSETLFEALRCMSHINHQLGRAATAIFYESLVSPIVPSDDII
CQLLKILETGYSPSLATSLKSQIGVDATWEKQQMAHKSQRKFAVEMLLSLHSLRTKATNW
SGVLNVIEKYLKYLTPHKSTQNFDSKGIYNIISSVLVLTTSQVARAMFESAFDVLLLLGY
LVNVCGQVYMMQTDVARIKLKLIPLIQEILMQWLILHFMTITPTTPPTVEDFSSRLSSLN
IGNKTDKRSLDGKLGSSDFTLACLLDFPCFSEGEDFLYSKSFPNPSKLIHLVQKFSSLVV
WGKTGEEFPFSSKPTLELASLLLCHGQYEAAENLFLIIDAHLSSRKSSQNAQSTDGEWCA
RLHLLGYCLLVRAKGRLHGTLKEQKISESIRCFFRAASGQGAPQSLQNLSFETGLQYSGE
HGSIAVWRLHYYQWAMQIFEQYGVNEGACQFALAALEQVDVVLNLSDGNNDDDLLPEPAT
TIRGRLWANVFKFTLDMKQYGDAYCAIISNPDEDSKYICLRRFVIVLCELGEAKVLCDGK
LPFVGFAEKVEQELVWKAERSDISARPNLYKLLYAFEVHRNNWRKAASYMYRYSVRLKKE
ATLDGRHLLSSALQERLQALAAAINALQLVDHAYAWIDSQYGDNFTHDQGSPNKKPRNVL
TANSASVDGAPQSWGLQYCVDIEMLEKEHVLTSAQYLLALVNDKFKFSGTQALGNLVDVL
IQENIYDMAFTIIVKFWKGSGLKRELERAFVAISQKCCPNRAGSSVIGSNVKASNLLLPS
SEDDTYADGKLNSSPVIHQFKGNGQWETLEVYLEKYRKLHSRLPVTVAETLLYTDPQIEL
PLWLVHMFKGGRRAMSWGMTGQEADAATLFRLYVDYGRHAEATNLLLEYLESFASLRPAD
VVNRKKMSAIWFPYTTIERLWSQLEELQSAGHMVEQCDKLKRLLRGALKSHLKQVEMDSE
DALSSAAGEETQNSSS
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcctctcgatccctcgccggcatggaggttcccatcgccggaagcgaaaag
gtccgatggatcgatctcatcgtcccttcctcctcctccatgccgtctcctcctcagctc
ccttcgtcccagccctccgcccctacggccttccggaacgccgcttcttgtcacgttatc
cctggagatcctccggcctatctcatctggaggcttcataagaatcttccaaatgtcctt
gaggtggttgagctttttccacataaagaatttcctgagaccggactgcaccttgtattt
caggacgcactctgtccctttgcctttttatgcaaaaatgagattcagagcggagcagga
aatggttacttgctttatgcactgacagtttcaggagttgcttatcttttcaacttgaga
agtccattatcttatatatctggttccaccttccctcagaatgagcttgtagagtttaat
gttcaaactcatgtacaaattggaaacattacagcggtaacagcagcgccaggatgcata
gtaattgggcgacaagatggatcaattggctgctaccaacttggaatactagatccaagt
gcaccaggtttcatgaatgagcttcgtgatgatgttgggattggtcgcttatggaatctt
gtgtcaaggggaaaggttattggggctgtgcaagatatggtgatatctggaatttgtgga
agaaaattgctatttgttcttcatttggatggaatcttgcgtgtatgggatcttgttagt
cgcatgaagattatcagtgataatgttagctcaagtgaactggaaggatctaatccctcc
aggttatgtgttggtgatgccaatcatgatacaaacctaatttgtttggcaattttacat
gaaggcattttggtatctgataggaagatggtcgctttgcatcatttcggttttagtgct
ggagaaaaggtcttgttatcgccagagcctgcgatgcagaatatccacttggaggaggga
aaactcattgactggaaactccattccagcaaactctggatacttaaggatgatggatca
atgctgtatgatctatcttattttgattataacgtggaacacacaggtacttataatttg
caagaagactttgtcgctgaccaactatttcaaagttccgaacatgctttagacgactta
atatggaccaacagttctattttttcttcaattaaggatcgaactgcctattttatctcg
tcaatatttttgcggaggttactccaacctggggtgtatcatagttctgctctacgtgca
acaattttggagcataagaagtacctatctgaccatgaatttaagtctcttactgtggct
ggattgaaaaaagagatttttacaattattgaaggcgagggagctactttgaattctagt
tcagccgtttatcactggaagagtttttgttcatgtttctttggccactggtgtcaaaac
agtatgccatacgggttgcttctcgattcttcaaatgatgtaattggtttaatcaggaag
agctcaatttctctattccgttctttggaaggcgccgaacacattatttatggttcttct
gatgaatttcaaaacctaaaatgttctgggatgattttgccagatagtgacattgattct
gaaaccctttttgaagcacttagatgtatgagtcatatcaatcaccaattaggcagagct
gctactgctatattttatgaatctcttgtcagtcctattgttccatctgatgatatcatt
tgccagttattgaagatactggaaactgggtacagtccatcattggcaacatctctaaaa
tcgcaaattggagttgatgctacttgggagaagcagcagatggctcacaaaagtcaaaga
aagtttgcagttgagatgttgttgtctcttcatagtttgcgtacaaaagctactaactgg
tctggagttttaaatgtcatagaaaaatacttgaagtatctgaccccgcataaaagcacc
caaaattttgattccaaaggaatttacaatatcatctcttctgtattagttctaactacc
tcccaagttgcaagagcgatgtttgagtcagcttttgatgtacttctgcttctggggtat
ctggtcaatgtctgtggacaggtgtatatgatgcaaactgatgttgctcgcataaaactt
aaattaattccactgattcaggaaatacttatgcaatggcttattctccattttatgaca
attacaccaactactccaccaacagtggaggatttcagctctcgtctttcttcattaaat
ataggtaacaaaactgataaaagatctttggatggaaagcttggttcatctgattttaca
ttggcttgtttgctggatttcccatgcttctctgaaggagaagactttctttattcaaaa
tcttttcctaatccgagcaaattaattcacttagtacaaaaattcagcagtttggttgta
tggggcaagactggtgaagaatttcctttttcctcaaaacctacacttgagctagcatca
cttctactttgccatggccaatatgaagctgctgagaatctttttcttattattgatgcc
cacttaagtagtagaaagtcatcccaaaatgctcaaagtactgatggtgaatggtgtgcg
cgccttcatcttctgggatattgccttcttgtgcgggcaaaaggcaggcttcatggaacc
cttaaagagcagaaaataagtgaatccatccgttgttttttcagagctgcatctggacag
ggagcaccacaatctttgcaaaatctctcttttgaaactggcctccaatattctggagaa
catggatctatagcagtctggagacttcattattatcaatgggcaatgcagatttttgag
caatatggtgtcaatgaaggagcttgtcagtttgctcttgctgctcttgagcaagtggat
gttgttcttaatttgagtgatggtaacaatgatgacgacctccttcctgaacctgcaact
acaattcggggacggctatgggcgaatgtctttaaattcaccttagatatgaagcaatat
ggagatgcctattgtgccataatctcgaatccagacgaggatagcaaatacatatgcctg
aggcgttttgttattgttctttgcgaacttggcgaagctaaggttctttgtgatggcaag
ctgccatttgtgggattcgcagaaaaagtagagcaggagcttgtttggaaggctgaacgc
tcagatatttctgcaaggccaaatctatacaaactgctttatgcttttgaagtgcatcga
aacaactggagaaaggctgctagttacatgtaccgatactctgtgagattgaagaaagaa
gcaaccttggatggaagacacctgctttcttcagcattacaagagaggctacaagcattg
gctgctgcaatcaatgctctgcaacttgttgatcacgcttatgcttggattgactctcaa
tatggtgataactttactcatgatcaaggttccccaaataaaaagcctagaaatgtcctg
acagcaaattctgcttctgttgatggtgctcctcagtcttgggggctgcaatactgtgtt
gatattgaaatgcttgaaaaggagcatgtgctaacatcagcgcaatatctgcttgctctt
gtgaatgataagttcaagttttctggaacccaagcactgggaaatttggtggatgttctg
atccaggaaaatatatatgacatggcttttacgataatagtcaaattttggaagggttcc
ggactaaaaagggaattggaacgggcctttgttgctatctcacagaaatgctgtccaaat
agagcaggctcctctgttatagggagcaatgtaaaagccagcaaccttctgctgccatct
tctgaggatgacacatatgctgatggaaagctaaattctagtcctgtaattcatcaattc
aagggaaatggccagtgggaaacacttgaagtctatcttgagaaatacagaaagttgcat
tcaagattgccggtgactgttgctgaaacacttctatatactgatcctcagattgagctg
cctctttggttggttcatatgttcaagggtggacggagggcaatgtcctgggggatgact
ggccaggaagcagatgcagcaaccttattcagactctatgtggattatggtcgacatgct
gaagctacaaacttgttgctcgagtacctagaatcctttgcatctttgagaccagccgat
gtagtcaatcgaaaaaagatgtcggcgatttggtttccttacacaacaattgaacggctg
tggtcccagcttgaggagttgcagagtgcaggtcacatggttgagcaatgtgacaaacta
aaaagattgttgcgtggagctttgaagagccacctaaaacaggtggagatggactcggag
gatgcgctatcctctgcagctggagaagaaacacagaattccagcagctag
DBGET
integrated database retrieval system
