Phoenix dactylifera (date palm): 103715545
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Entry
103715545 CDS
T03274
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103715545
03041 Spliceosome [BR:
pda03041
]
103715545
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103715545
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103715545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_occluded
RRM_5
Metallophos_C
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103715545
NCBI-ProteinID:
XP_008801437
UniProt:
A0A8B8J9H3
LinkDB
All DBs
Position
7:1098459..1107398
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AA seq
424 aa
AA seq
DB search
MNPRLNQQQALMQQAMLQQQHLYHSGVLAAAMSQMEPVPSGNLPPGFDPSTCRSVYVGNI
HPAVTESLLAEVFQSIGPLEGCKLIRKEKSSFGFVDYHDRRSAALAIVSLNGRQIYGQAI
KVNWAYAGGQREDTSGHFHIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDNKTGRSRG
FGFISFRNQQDAQNAINDMTGKWLGSRQIRCNWATKSAGEDKQNNDNQNAVVLTNGNSGN
ADGGQENANDEPPENNPAYTTVYVGYLAHEVTQAELHHQFHFLGAGVIEEVRIQREKGFG
FVRYQTHEQAALAIRMANGRILCGKSVKCSWGTKPTPPGTTSNPLPPPVPPFQMLQTPGL
HQGYTAAELLAYQAQAAAAAAAGPLAGQHGLAAQVSGGLLSGGSQAMYDGYPSHSSARQL
MYYN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaggttaaaccagcagcaggccttaatgcagcaggcgatgctccagcagcag
catctttaccattctggcgttcttgctgcggccatgtctcagatggagcctgttccaagt
ggcaatctccccccagggtttgatccatctacatgccgcagtgtgtatgtgggcaatatc
catccagctgtcacagagagccttcttgctgaagttttccaaagtattggtccacttgaa
ggatgcaagcttattcgaaaagagaagtcatcttttggatttgttgattatcatgatcgg
aggtcagcagctcttgcaattgtgtcattgaatgggcgccagatatatggtcaggcaatt
aaggtgaattgggcatatgctggtggccagagggaagatacatctggacacttccatatt
tttgttggggatttgagtcctgaagtaactgatgcaactctttatgcctgtttctcagta
tatcccagttgttctgatgcgcgtgtcatgtgggataacaaaacagggcgctctagagga
ttcggatttatttctttccgcaatcagcaggatgctcagaatgctataaatgacatgact
ggtaaatggcttggaagcagacaaatacggtgcaattgggcaaccaagagtgctggggag
gacaaacagaacaatgataatcagaatgctgttgtattgacaaatggaaattctggtaat
gcagatggaggccaggagaatgcaaatgatgagcctcctgaaaataatcctgcctacaca
actgtatatgttggctacctggctcatgaggtgacacaagctgagctccatcaccaattt
cactttctaggggccggtgttattgaagaagtgcgcatacagagagagaaaggatttgga
tttgtgagatatcaaacccatgaacaagctgctttagccattcgaatggccaatggaagg
atcctatgtgggaaatcagtgaaatgctcatggggtactaagccaacccccccggggaca
acctccaaccctctaccacccccggttcctcctttccaaatgttacaaacgccaggtctc
caccaaggctatacagctgcagagctgctggcttaccaggctcaggctgctgctgctgct
gctgctgggccattggctggccagcatggccttgctgcacaggtatctggagggctcttg
tctggaggttcccaggcaatgtatgatggctatcccagtcactcatctgctcgacagcta
atgtattacaactag
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