Phoenix dactylifera (date palm): 103715581
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Entry
103715581 CDS
T03274
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 24
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103715581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103715581
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
103715581
Ubiquitin system [BR:
pda04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
103715581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
tSH3-B_UBE2O
SH3-B_UBE2O
RWD
SH3-C_UBE2O
Motif
Other DBs
NCBI-GeneID:
103715581
NCBI-ProteinID:
XP_008801486
UniProt:
A0A8B7CLH4
LinkDB
All DBs
Position
4:complement(8511824..8535452)
Genome browser
AA seq
1521 aa
AA seq
DB search
MDLLVVDSESEAYTDSSDSEEQYDTESAYGGHAQSILSSLDESIGKIDDFLALERGYVHG
DIVCSTTDPSGQLGRVMDVDMIVDLETISGELIKDVNSKKLLRVRSFAPGDYVVHGSWLG
RVERIFDLVTILFNDGAKCEILMRDSEVLTPLSMNLLEDAPYPYYPGQRVRVNAPTISKS
ARWSCGSWKVSRDEGTVSHVEVGLVHVNWIASIMISWGIHSLTPPRSQDPRNLTLLSCFP
YANWQLGDWCTVSVDYFHDTQVTAEKSAPLNAAPKSLTKMQKELGINGRDYKQMYVIAKT
KSKVDVLWQNGNYSVGVDPRSLFPVNNLGDHDFWPEQFVLEKVTLEDVHVPRLQRLGIVK
SVDSHERTVNVKWIAPEVKQAVDFTGASSVEMVSAYELVENPDISYSICDIVFRHVPNFE
NMENNLEVHSFGQRQLHVVHEQILNNSLLGKDALQKKHIDETHDEDFQGYLSYIGNVIGY
RDECIQVRWASGIISKVQPFEIIGLDRLLDSASTPSSIEESIPATVSKEIAEQEKQLLHK
KEKDIVNDTSEDCLKNVWRSTAFLFPQAAFGFLTNVAASLFGSRGSTSLSGSKKGVSKYQ
ILKREELKLDLHDLDMENLKQRVEEAKAAKQSEEPTFLSGNGTPTNFKQFDIVDDYSDHH
FVNSTGSSLVSSQVTRGWLKKVQQEWNILKKDLPDSVYVRVYEERMDLLRASIVGAPGTP
YHDGLFFFDIFFPPDYPHEPPLVHYKSSGLRLNPNLYESGKVCLSLLKTWTGTGTEVWNP
ESSTILQVLLSIQALVLNEKPYFNEAGYDKQIGRAEGEKNSITYNENAFILSCKSMLYLL
QNPPKHFEALVEEHFTRRSHDILVACKAYLGGAPVGHAYKCAKVLDQGLESCSYGFKIML
AKIFPKLIAAFTERGIDCSQFLDQKNNKTIKVRSFENRKTQTLFFPSPPSPPHLRSISPP
IVASSPFPSPFSLSPSERLLRNPSCRRRSGPRRRSDRNPTDRRHWLFLVGSMEPPPAANY
ATHNSKLRLFPAGASYQDPDVMEVSSSSAWNSSHQKRKRGQVVPHDVIEIDGDDDPDGVV
IIGENTSDYKNKQPMGYHKDWQKHVKEALSNDPVGSTSNHDSMNDALLGAFKSSEPSLLD
YTFADDYDYDDCDYDEDDYEGYAYETELIDNDCNFSLAAKFDEMDLPPGVEATVPWLEKP
ASERPRASKQKIVIEDEIDVKYKSFKQFDTVQDHSDHYFSRPELLKHIPTVKKPAKDWSK
RIQNEWKVLEKDLPEAIYVRIYEDRMDIFRAVIIGPGGTPYHDGLFFFDFYFPPSYPHDP
PMVHYHSGGLRLNPNLYACGKVCLSLLNTWSGSGCEKWNPSKSTMLQVLVSIQALVLNSK
PYFNEPGFAQTANTPYGEKKSLAYNEDIFLLSCKTMLYTLRRPPRNFEDFVAGHFRKYGH
AILVACRAYMDGAQVGCVVGNGVQDVDEGDKSCSSAFKSSLRKLFEDLLMEFTVKGADCD
EFLAQKVKDGAARAADTTLKL
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcttgttgttgactcagagagtgaggcctacacagattccagtgatagtgag
gaacaatatgacactgaatctgcatatggtgggcatgctcagagcatcctgtcaagtctg
gatgagagcattggaaaaattgatgactttcttgcattggaaagaggctatgtacatggt
gacattgtctgctccaccacagatccctcagggcaattaggccgggttatggatgttgat
atgattgtagatttggagacaatttctggtgaactgataaaagatgtaaacagcaagaag
cttcttagagtcaggtcctttgcacctggggactatgtagttcatgggtcatggctggga
agggtggagagaatatttgatttggttacaattttgttcaatgatggggcaaagtgtgaa
atattgatgagagactcagaagttttaacacctctttctatgaaccttctggaagatgca
ccatacccatactatccaggtcagcgtgtaagggttaacgctccaacaatttccaaatct
gcgagatggtcgtgtggctcatggaaggtcagtcgagatgaaggtactgtttcccatgtg
gaagtaggattagtgcatgttaattggattgcttccatcatgatcagctggggcatccat
tcattaactcctcctcgttcccaagatccgagaaaccttactttgctctcctgttttcca
tatgcaaattggcaacttggtgattggtgtacagtttcagttgattacttccatgataca
caggtgactgctgaaaagtcagcacctctgaatgctgccccaaagagcctgaccaaaatg
cagaaggaattgggaataaatggtcgagactataagcagatgtacgtcattgcaaagacc
aagagcaaggttgatgtcctgtggcaaaatggtaattactcagttggtgttgacccacga
tccttattcccagtgaataatcttggtgatcatgatttttggccagagcagtttgtgttg
gagaaggtcacattagaggatgtgcatgtaccaaggcttcaacgcctggggattgtgaaa
agtgtggattcacatgaacggactgtgaatgtgaaatggatagcccctgaggttaaacag
gctgttgattttactggtgcatctagtgtggagatggttagtgcttatgagctggttgaa
aatcctgacatctcctattccatttgtgacattgtgtttagacatgttccaaattttgag
aacatggaaaataaccttgaggtccatagttttgggcagaggcaattgcatgttgtacat
gagcaaatactaaacaattcacttctgggaaaagatgctcttcaaaagaagcacattgat
gaaactcatgacgaagattttcaaggttatttatcatatataggcaatgtcataggttac
agggatgaatgtattcaagtaagatgggctagcggtattatatctaaggttcagcctttt
gaaataattggattagatagacttcttgattctgcttccacaccatcatctattgaggaa
tctattcctgcaactgttagcaaagaaatagctgagcaagagaaacaattattgcataag
aaagaaaaggatattgtaaatgataccagtgaagattgcttgaagaatgtgtggagaagt
actgcctttttgtttccccaagcagcttttggattccttacaaatgttgctgcaagtcta
tttggttctcgtggttccacttccctgtctggctcgaagaaaggagtgtccaagtaccag
attctgaagagagaagaacttaaattagatctacatgatttagatatggaaaatttgaag
cagcgagtagaagaagctaaagctgctaaacagagtgaagaaccaacatttttatcaggc
aatggcacaccaacaaacttcaagcaatttgatattgttgacgactactcagatcatcat
tttgtgaatagtactggcagtagtttggtatcatcccaggtaacaagaggttggttgaag
aaagttcaacaagaatggaacatcctaaagaaagatctaccagatagtgtttatgtcaga
gtttatgaggaaagaatggatctcttgagggcatcaattgttggagcacctggaactccc
taccatgatggtctcttcttcttcgatattttctttcctcctgattatcctcatgaacca
cctctggttcactacaaatctagcgggcttcgattgaacccaaacttatatgagtcggga
aaggtctgtctaagccttctcaagacatggacgggcactggcactgaagtctggaatcct
gaaagctccaccattcttcaagtactgctatctattcaggcccttgttctcaatgagaaa
ccatatttcaatgaggctggatatgacaaacagattggtagagctgagggtgagaagaac
tccatcacatataatgagaatgcttttatactgtcatgcaagtcgatgttatacctcttg
cagaacccacctaagcattttgaggcacttgtggaggagcattttactcgtaggtcacat
gatattcttgttgcctgcaaagcttatttgggcggtgccccggttggacatgcttacaaa
tgtgcaaaggtgttagaccaaggtctggagagctgttcctatggtttcaagatcatgctt
gcaaaaattttcccaaagcttatagcagcctttacagaaagggggattgattgcagtcag
tttcttgaccaaaagaacaataaaacaataaaagttaggtcctttgaaaatcggaagacc
cagactctcttttttccctctccaccctctcctccccatctgcgatcaatctctccccca
attgtcgcttcctctcccttcccttctcccttttctctctcgccatcggagcgattgctt
cgaaaccctagctgccgccgccggagcggaccccggcgccgatccgatcggaatcccacc
gatcgtcggcattggttgttcctggtcggctccatggagccgccgccggccgccaattac
gccacccacaattccaagcttcgccttttccccgcgggggcgtcataccaggatccggat
gtcatggaggtttcctcgtcctcggcctggaattccagccatcagaagcggaagcggggt
caggttgttcctcatgatgtgattgagatagatggagatgatgatcctgatggagttgtg
atcattggtgaaaacacatcagattacaagaacaagcaacctatgggataccataaagat
tggcaaaagcatgtaaaggaagctttgtccaatgatcctgtgggttcaacctcaaatcat
gactccatgaatgatgctctgctaggagccttcaaaagttctgagcctagcttactggat
tacacctttgctgatgactatgattatgatgactgtgattatgatgaagatgattatgaa
ggatatgcatatgagacagagttaattgataatgattgcaactttagtttggctgctaaa
tttgatgaaatggacctgcctcctggggtggaggcaaccgtaccttggttagagaagcct
gcatctgaaaggccaagagcgagcaagcagaagatagtgattgaagatgagattgatgtg
aaatataaatcatttaaacaatttgatactgttcaagatcattctgatcattattttagc
agaccagagcttctcaaacatattccaacagtaaagaagccagcaaaggattggtcaaaa
aggattcagaatgagtggaaggtccttgagaaagatttaccggaggcgatttatgttaga
atttatgaagataggatggacatttttagggctgttatcataggaccaggtggaactcct
tatcatgatggcttattcttctttgacttctactttcctcccagctatccccacgatcct
ccgatggtacattaccactctggtggtcttcgactcaatccaaacttgtatgcatgtggg
aaggtttgtctcagccttctgaacacctggagcggcagtggatgtgagaagtggaatcca
tcaaagtcaaccatgctgcaggtccttgtctctatccaggctttagttctgaattcaaag
ccttacttcaatgagccagggtttgctcagacagctaatacaccctatggagagaagaaa
tccctggcttacaatgaagatattttccttttatcctgcaagacaatgctgtatacgcta
cggaggccaccaaggaattttgaggacttcgttgcaggacattttcgcaagtatggacac
gcaatccttgttgcatgcagagcttacatggatggagcacaggttggatgtgttgtcgga
aatggggtgcaggatgttgatgagggtgataagagttgctcatcagcattcaagagttcg
ctaaggaagctctttgaggatctcttgatggagttcactgtcaaaggagctgattgtgat
gaatttcttgctcagaaagtcaaagatggagctgccagagcagcggacactactctgaag
ctttaa
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integrated database retrieval system
