Phoenix dactylifera (date palm): 103715661
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Entry
103715661 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103715661
04121 Ubiquitin system [BR:
pda04121
]
103715661
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103715661
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103715661
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103715661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
VPS18_RING_C
C1_1
Motif
Other DBs
NCBI-GeneID:
103715661
NCBI-ProteinID:
XP_008801592
UniProt:
A0A8B7CLM9
LinkDB
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Position
3:complement(67691..69555)
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AA seq
411 aa
AA seq
DB search
MDTASPYWCYRCSRFVRVWPHDAVVCPHCDGGFLEEVETPPRFPTAGGESRRRRSPVAAR
YMANDDGAAPPYHQHADLRFRRHRRTSAGDRSRFNPVIVLRGPSAGGGGDADRAPAASFE
FYYDDGAGSGLRPLPESVSDFLMGSGFERLLEQLTQIDIRGIDGGRACEHPPASKAAIES
MPTIEIAAGHVKMDAHCAVCKEPFELGTEAREMPCKHIYHQDCILPWLSLRNSCPVCRHE
VPADVRGRGAAETDGDEQAPMGGNAEDLVGLTIWRLPGGGFAIGRFSGGRIAGERELPGV
YTEMDGGFTTGGAPRRISWTSRGSPTRERRGIGRVFRNFISFFGRFRSSSSASSRSSSDS
GSLFHRGASDIWPSIGVHEGAARVGQWKMGILEQLQDGDKGKSRRKFASFV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcctcgccctactggtgctaccgctgcagccgcttcgtcagggtctggccg
cacgacgccgtcgtctgcccccactgcgacggcggattcctcgaggaggtggagacccct
ccgcgtttccccaccgccggcggcgagtctcgcaggcgacgctcccctgtcgcggcgagg
tatatggcgaacgatgatggcgccgcgcccccctaccaccagcacgccgaccttcggttc
cgccgccaccgtcgcacctccgcgggcgaccgctcccgcttcaacccggtcatcgtcctc
cgcggcccgtccgcaggtggcggcggggatgccgaccgcgcccctgctgccagcttcgag
ttctactacgacgacggggcgggatccggcctccggcccttgcccgaaagcgtgtcggat
ttcttgatgggctcgggcttcgagcggctcctggagcagctcacccaaatcgacatccgc
ggtattgatggcggccgggcgtgcgagcacccgcccgcatcgaaggctgccatcgagtcg
atgcccaccatcgagatcgccgccggccatgtcaagatggacgcccactgcgccgtctgc
aaggaaccgttcgagctcggtaccgaggctcgggagatgccgtgcaaacatatataccat
caagattgcatcttgccatggctttcgctccggaactcttgccctgtgtgccgccatgag
gtgcctgcagatgtccgtggaaggggtgcggcggagacggacggtgatgaacaggctccc
atgggtgggaacgcggaggatttggtcggcctcacgatatggaggctgccgggaggtggg
tttgcaatcgggaggttctcaggggggagaatagccggggagcgggagcttccgggagtt
tacacggagatggacggtggattcaccaccggtggtgcacccagaaggatctcatggacc
tctagagggagtccgacgagggagagaagaggaattggtcgcgtatttcgcaatttcatc
tcattttttgggcgcttccgctcatcttcgtccgcttcttcaagatcgagttcagattct
ggttccctgtttcaccgaggcgcctcagacatttggccttcgataggagttcacgaaggc
gcagctcgagttgggcaatggaagatgggaatattagagcaattacaagatggtgacaaa
ggaaaaagtcgaagaaaatttgcctcctttgtctaa
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