Phoenix dactylifera (date palm): 103716018
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Entry
103716018 CDS
T03274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Module
pda_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103716018
Enzymes [BR:
pda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103716018
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103716018
NCBI-ProteinID:
XP_008802072
UniProt:
A0A8B7CM35
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Position
14:complement(10823560..10825527)
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AA seq
387 aa
AA seq
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MAPPPKSFLLTFLFISSFTIAMAAYNIVDFGAKSDGRTDSAKAFLSAWTAACEANKPATV
YVPPGKFFLSKADVSGPCNNKAIKIFIHGTLIAPSSYSSSNTLWIRFKYVEGLSIYGGTL
DGQGQALWACKQAGRSCPVGATSLTISQGKNVLISGMKIQNSQNFQMSIYGSTGVTVERA
TITAPEESPNTDGIHVQMSSFVTIRNSTMRTGDDCISMGAGSANVWIQKINCGPGHGISI
GSLGLSGDDEGVQNITVRSATFTGTQNGLRVKTWAKPYKGFVKGVTFENAIMKDVQNPIV
IDQNYCPSKKNCPGQSSGIKISEVKFKNVQGSSATPVAVKFDCSPSNPCTGIELKDIKLK
YQNKGAQAFCRNARGTVAGIVEPPSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaccacccaagagctttcttctcacctttctcttcatctcctccttcacaata
gcaatggcagcctacaacattgtagactttggtgccaaatccgatggccgaaccgactcg
gccaaggcattcctcagtgcatggactgctgcatgcgaagctaacaagcctgcgacggtc
tacgtgccgcccggcaagttcttcttgagcaaggctgatgtctctggcccatgcaacaac
aaagcgatcaaaatcttcatccatggcaccctcattgcaccctccagttatagctcatca
aacacactgtggatcaggtttaagtacgtcgaagggctgtccatctacggcgggacgctc
gacggccaagggcaggctctgtgggcatgcaaacaggctggccgcagctgcccggtcggc
gccacgtcactgacgatcagccaaggcaagaatgtgttgatcagcggcatgaagattcag
aacagccagaacttccagatgtcaatttatggcagcaccggcgtgacggtcgaacgtgcg
acgatcaccgcccccgaagaaagccctaacaccgacggcatccacgtccagatgtcgagc
ttcgtcaccattaggaatagcaccatgaggaccggcgacgactgcatctccatgggagct
gggtctgccaatgtctggatccagaaaattaactgcggacccggtcacggcatcagcatt
ggaagcttggggctctcgggggacgacgagggagtgcagaatataacggtgaggtcggcg
acgttcaccgggacgcagaacgggctaagggtaaagacatgggcaaaaccctacaaagga
ttcgtgaaaggtgtcacgttcgagaatgccatcatgaaggatgtccagaacccgatcgtc
atcgaccagaactactgccccagcaaaaagaattgcccaggccagagctcaggaatcaag
atcagtgaggtgaagttcaagaacgttcaggggtcgtccgcaactccggtggcggtgaaa
ttcgactgcagcccgagcaatccatgcacaggaattgagttgaaggatataaaactcaag
tatcagaacaagggggcacaggctttctgtaggaatgcaaggggaactgtcgcaggaatt
gtcgagccgccgagttgcctctaa
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