Phoenix dactylifera (date palm): 103716021
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Entry
103716021 CDS
T03274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Module
pda_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103716021
Enzymes [BR:
pda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103716021
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF1565
NosD
Motif
Other DBs
NCBI-GeneID:
103716021
NCBI-ProteinID:
XP_008802086
UniProt:
A0A8B7CM50
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Position
14:complement(10816596..10818850)
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AA seq
385 aa
AA seq
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MAQSMSFLLALLFLSSSTMAMAALNIVDLGAKPDGRTDSARPFLRAWAAACRTNKPLTIY
VPRGRFFLSQVEFLGPCNNKAIKFLIHGTIIAPAGYSSSMNWIRFKYVDGLSIYRGTLDG
RGQSLWACKMAGRSCPFGATSLSFSRSKNVLISGLTSINSKFYHISIFGSSNVKIRGVKI
TAPDASPNTDGIHLQMSSGITVERSTIGTGDDCISMKTGTTNVRIHRVKCGPGHGISIGS
LGDAANEAGVQNITVTSVVFTGTDNGLRIKTWAKNNRGFVKGVTFANAVMQNVRNPIIID
QNYCPSGNNCPVQGSGVKISGVSYTNVRGSSATPVAMRFDCSPSNPCSEIGLKDIKLRYR
KKRAQAFCKNVRGTTAGFIDPPSCF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtccatgagttttcttctcgcactgctcttcctctcctcctccacaatggcc
atggcagccctcaacattgtagacctcggtgccaaacctgatggccgaactgactcagcg
aggccattcctgagagcatgggctgctgcatgccgaactaataaaccgctgacgatctat
gtgccgcgaggcaggttcttccttagtcaggtcgagttcctggggccgtgcaacaacaaa
gcgatcaagttcttaattcatgggaccatcattgcacctgctggttacagttcgagcatg
aactggattaggtttaagtatgttgatggtctgtcgatctatcgtgggacgcttgatggg
cgagggcagtctctctgggcctgcaagatggccggccgcagctgcccatttggcgccaca
tctctgtcattcagtcggtcgaagaacgtgctcatcagcggcctaacttcgattaatagc
aaattctaccacatttcaatcttcggcagcagcaatgtgaaaatccgaggtgtgaagatc
actgccccggatgccagccccaatactgatggcatccatttgcagatgtcgagcggcatc
accgtcgagcggagcaccatagggaccggcgacgactgcatctccatgaaaactgggact
accaatgtcaggatccatagagtcaaatgtggcccgggacatggcatcagcattggaagc
ttgggggatgcggctaatgaggccggcgtccaaaacataacagtgacatcggtggtgttc
actgggactgataatggactaaggatcaagacatgggcgaagaacaacagagggtttgtg
aaaggggtgaccttcgcaaatgccgtcatgcagaacgtccggaatccaatcatcatcgac
cagaactattgccccagcggcaataactgcccggtccagggctcaggggtcaagatcagt
ggggtgtcatacactaacgtccggggatcgtcggcgacgccggtagccatgagatttgac
tgcagtccgagcaacccgtgcagcgagattggtttgaaggacataaaactcaggtatcgg
aaaaagagggcgcaggccttctgtaagaatgtgagggggactactgctggttttatcgac
ccaccgagctgcttctga
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