KEGG   Phoenix dactylifera (date palm): 103716180
Entry
103716180         CDS       T03274                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103716180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103716180
Spliceosome [BR:pda03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103716180
 Complex B
    103716180
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 103716180
NCBI-ProteinID: XP_038971069
UniProt: A0A8B8ZGY7
LinkDB
Position
17:complement(14279894..14295550)
AA seq 601 aa
MSGSGSRREGSGEGSSIRSRSSRTKREGGRGDRGLEVRDSHRQHNSRDFMQGKTRMRVRD
GDRDGDWYRDNKRDQDRGRERNQYGERERDHGRERDQNYHRRDHHRNTNTKDDGGKDRSD
ESDCHGNHDNDRYREYDRDGSRRNRHVSCSRSPSKSKRVSGFDMAPPGAPLLPGAAGTGQ
LPGIPQPLTGILPTMFPLPTLPLGSMSVMPAPAMTQQATRHARRVYVGGLPPMANEQTIA
TFFSNIMTAIGGNAAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVSVR
VRRPTDYNPSLAAALGPSHPNPHLNLAAAGLTLGTIGGAEGPDRIFVGGLPYYFTDAQIK
ELLESFGPLRGFDLVKDKDTGNSKGYGFCAYQDPSVTDVACAALNGLKMGDKTLTVRRAS
ASTGQIKPEQELILQQAQQHIAMQKMALQAGNAPPFPGAGLALAAPVAFPTKVLCLTEVA
SIDELRDDEEYSEILEDMREESGKFGSLVNVIIPRPTSTGELIPGVGKLGIIINYTSNLE
LLRQSRVSLDARVFLEYTDVTGSTRAKVALHGRKFSGNIVTASYYPEDKFTMGDYGAAAV
G
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtccggctccggcagccgccgggaaggcagcggcgagggctccagcattcgcagccgc
tcttctcgtaccaaaagggaaggaggacgaggcgatcgcggcctcgaggtgagagactct
catcgtcagcacaattctcgtgattttatgcaagggaagacgaggatgagggtgagagat
ggagatagagacggagattggtatcgtgataacaaaagagatcaggatcgaggcagggaa
agaaatcaatatggggaaagagaacgggatcatggtagggaaagagatcagaattatcat
cgccgagaccatcacagaaatacgaacacaaaggatgatgggggaaaggacagatcagat
gaatctgattgccatggcaatcatgataatgaccgctaccgagaatatgaccgagatggg
agtaggagaaatagacatgtatcatgctctcgttctccatctaaaagcaagcgcgtaagt
ggttttgacatggcccctcctggcgctcctcttctgcctggtgctgctggtacagggcag
ctgcctggcattcctcaaccgctgacaggaatactcccaaccatgtttcctcttccaacc
ctaccgctaggatcaatgtcagtgatgccagctccagcaatgactcaacaggcaacaagg
catgcacgccgtgtatatgttggaggccttcctcccatggcaaatgaacagacaattgct
acattttttagcaacatcatgactgctataggaggaaatgctgctggtccaggtgatgct
gttgtcaatgtctacataaatcacgaaaagaaatttgcttttgttgagatgcgaacagtt
gaagaagcaagtaatgcgatggcattagatggtatcatttttgagggagtctcagtgaga
gttcgaagacctaccgactataatccttcattggccgcagcactcggacctagccacccc
aatcctcatcttaacctagctgcagccggtctcactcttggcacaattggtggagctgag
ggacctgaccgtatctttgtaggtggtctcccctactacttcacagatgcacaaataaag
gagctacttgagtcctttggacctctgcgtggatttgaccttgttaaagataaggacacg
ggaaactcaaaaggttatggtttttgtgcctatcaggatccatcagtcacagatgtggct
tgtgctgcacttaatggtctgaaaatgggtgacaagacactaaccgtacgccgtgcttct
gccagtactgggcaaattaaaccagagcaggagttgattttacagcaggcacaacaacat
atagctatgcagaaaatggctctacaggctggaaatgccccaccttttcctggagcaggg
ttggcacttgctgcccctgtagcatttccaactaaagttctatgcttgactgaggtggcg
tccatcgatgagctgagggatgatgaggaatattcagaaatattagaggatatgagagaa
gaaagtggaaaatttggttcattggtaaatgtgatcataccacgcccaacttcaactggg
gaattgattcctggagttggaaagctaggtattataataaattatacttcaaacttggag
ttattgagacaatcaagggtgagcctcgatgcaagggtgtttttggagtacacggatgtc
acaggctcgactagggcaaaggttgctctccatggaagaaaattttcagggaacattgtc
actgcttcatattaccctgaggacaaatttactatgggcgattatggggcagcagcagtg
ggttga

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