Phoenix dactylifera (date palm): 103716379
Help
Entry
103716379 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103716379
04131 Membrane trafficking [BR:
pda04131
]
103716379
04121 Ubiquitin system [BR:
pda04121
]
103716379
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103716379
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
103716379
Membrane trafficking [BR:
pda04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
103716379
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103716379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
103716379
NCBI-ProteinID:
XP_008802572
UniProt:
A0A8B7CMX4
LinkDB
All DBs
Position
17:14090068..14097799
Genome browser
AA seq
506 aa
AA seq
DB search
MLQIRLNKGSAGDSGGAAAKPPPAAETVTVACAEHLVLADLPVAKSIGAITSSGSTSVRS
VGRRSRRHLGERVHFCVRCDLPIAIYGRLIPCEHAFCLTCARNDASCYLCEERIQKIQTI
KMMEGIFICAAPHCLKSFLKQPEFDSHIHDSHADLLQPNAEREGGNGADARTSSTDLHKQ
SMLQELSTARAPPRSGFSPSSNSQLQDREERTRRHQSRDQPMLKPPLQPKPPLFHSRQQH
QPGDPQPDNNPPQGSDRPQNWIHQPQSFDNQSGPYQRRDSDQLPPDKLAGVPMEFSFSNY
SPLQLQQPPQPPNYPIPGSTNQASMPPPSFNYPFPADGSQQFYSAPFEMPRPEMMPVSGS
EQGSVLGFPPVPAGLASFAGSFPRPWGMGLVGMPSLMVGQGVPEGYMNATDNQGRISEGF
PPNHPQFGKESELQGASAAHNDGKGVLAAQPPPLQLPLPPPPPPPLLLPISNQLSAGNFS
SFANVNQEGRNYGWQNDSRGFGNGPE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccggctgaacaagggatcagcaggggacagcggcggggcggcggcgaag
ccccctcctgcggcggagacggtgacggtggcgtgcgccgagcacctcgtcctcgccgat
ctccccgtcgccaagagcatcggcgccatcacctcctccggctccacctccgtccggtct
gtcggccgccgctcccgccgccacctcggcgagagggttcacttctgcgtccgctgcgac
cttcccatcgccatctacggccgccttataccctgtgaacatgctttctgtttgacatgt
gcaaggaatgatgctagctgctatctttgcgaagagcgtattcagaagattcaaactata
aagatgatggagggcatcttcatatgtgcagctcctcactgtctgaagtcctttctgaag
caaccagaattcgattcacatatccatgattcccatgctgaccttctccaaccaaatgca
gagagggaaggtgggaatggagcagatgcaagaacttcttcgacggacctgcataagcaa
tctatgctgcaagagctatccactgctcgtgctccaccaaggtccggcttctcacccagt
tcgaattctcagctccaggatcgtgaagaaagaactcgtcgacaccagtccagagatcaa
ccaatgctgaagccaccactacagccaaagccgccattgtttcacagccgccaacagcac
caaccaggtgatccacagccagacaacaacccgcctcaaggctctgacaggccccagaac
tggattcatcaaccccaaagctttgataaccagagtggtccttatcagcgacgagactcc
gaccaattgcctccagacaaactagcaggggttcccatggaattttcattctccaattac
tcacctctgcaattgcaacaaccccctcaaccaccaaactatccaatacctgggagcacc
aaccaggcctcaatgccaccaccatcatttaactaccctttccctgctgatggatctcag
cagttctacagtgctccttttgaaatgccacgaccagaaatgatgccagtgagtgggtca
gaacaagggtcagttttgggatttcctccagttccagcaggtttagcaagttttgcaggc
agttttcctcgtccatggggcatggggcttgttggcatgccttcattaatggtgggtcaa
ggagtacctgaaggttacatgaatgcaacagataaccaggggaggatttcagaaggtttc
ccgccgaatcatcctcaatttggtaaggaatcagaactccagggtgcttcagctgctcat
aatgatggcaagggtgtgttggcggcacaaccgccacctctgcaattgccattgccacct
ccaccgccacctccactgctgctgcctatttcaaatcagctgagtgcaggaaatttctcc
agttttgccaatgtaaatcaagagggccgcaactatgggtggcagaatgacagccgtggg
tttggaaatggtccagagtag
DBGET
integrated database retrieval system
