Phoenix dactylifera (date palm): 103716559
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Entry
103716559 CDS
T03274
Name
(RefSeq) structural maintenance of chromosomes protein 6B isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103716559
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
103716559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_13
AAA_29
AAA_21
AAA_15
DASH_Ask1
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103716559
NCBI-ProteinID:
XP_038976557
UniProt:
A0A8B8ZT57
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All DBs
Position
2:complement(9751884..9808033)
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AA seq
1057 aa
AA seq
DB search
MGDSRDFAEPRGNSARSGAGIISRICLENFMCHSSLQIEFGDWVNFITGQNGSGKSAILT
ALCVAFGCRAKGTQRAASLKDFIKTGCSYAAIHVEIKNQGEDAFKHEIYDDLIILERKIT
ESTSSIILKDCQGKKVAYRKGELDELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFK
FFFKATLLQQVNDLLQSITENLSAATEVVEQLEKSIMPKVKELNELQEKIKNMEHVEEIA
QEVQHLKKKLAWSWVYDVDRQIQEQNGKLEVLKERIPICQAKIEQCVAKVEELNGLLTGK
KSQIAFLTEKTSEVRRKKEELEQNLSSATKERLELEEVHSREINFTKKMSKRVKLLEQQI
HDIHEQHMRNTQAEESEIEERMKKLQDDVDVACRSVARLQEEEHSLSEKLSAAKNATNDM
SKEIEENERRYRDLCSQMNEFQQHRMNKVTAFGGGRVLNLLQVIERHHRKFKSPPIGPIG
AHVTLVSGDIWALAVDCAVGRLLDAFIVTDHRDSLLLRDCAREANYANLQIIIYDFSRPR
LNIPNYMLPSTNRPTILSVIHSDNPTIINVLVDIGNVERQVLVQDYEMGKSVAFDQRIQN
LKEVYTSDGYRMFYRGSVQTTLPPNKRARSGRLRSSIDDEIYNIQNEASKVKELVQESRG
RKRDSEEALRDLELNVQNTKRRRINEEKLLMSKQLALRDMKNSYASQQNDDPVNVEELYQ
EISQVQDDLQGKEMLLEKLRIRMTMAQEKANNLKNSIEDLCESAKGEIDAIEVAERELLL
AEDELRAAEAKRIHYEGVMQNKVLPDIKTAEAEYEELQHNRQENFRKASIICLECEMEAL
GGCAGYTPEQLSARLNRLRQRLQHESQRYNESIDDLRAMYDKKERKILKKQNTYATFREK
LNACQKALDLRWSKFQRNANLLKRQLTWQFNGHLRKKGISGHIKVDYEQKVLSVEVKMPQ
DASGNSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLV
DFAVAQGSQWIFITPHDISMVKPGERIRKQQMAAPRG
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggagattctagggatttcgcggagcctcgcgggaactccgccagatcgggggcgggg
atcatctcaagaatctgccttgagaatttcatgtgtcatagcagcctccagatcgagttc
ggggactgggtcaacttcatcactggccagaacggaagtggaaaaagtgcaatattaacg
gcactctgtgttgcatttggttgccgagcaaaaggcacccagagggcggcctctttgaaa
gatttcataaagaccggctgcagttatgcagctattcatgtggaaatcaagaatcaaggg
gaagatgctttcaagcatgaaatctatgatgatctgattatcctcgaacgcaagattacg
gagtcaacaagctccatcatattaaaggattgtcaaggaaaaaaggttgcctatcggaaa
ggtgaactagatgaactagtggagcattttaatattgatgttgaaaatccatgtgtcatt
atgagccaagacaaaagcagagagtttttgcattccgggaatgataaagacaaatttaag
ttctttttcaaggctacacttctacaacaagtaaatgatcttctacaaagtatcacagaa
aatttgagtgctgcgactgaagttgttgaacaactggaaaaatcaataatgcccaaagtt
aaagaacttaatgagttacaggagaagattaagaacatggaacatgtagaagaaatagct
caagaagtgcaacatttgaagaaaaaacttgcctggtcatgggtatatgatgttgataga
caaattcaggaacaaaatggcaagcttgaagtgctcaaagagcgcattcccatctgccaa
gctaaaattgagcaatgtgtggctaaggtggaggaattgaatggcttgcttaccggtaag
aaatcccagattgcatttttgacagaaaagacctcggaagtaaggagaaagaaggaagaa
ttggagcagaatctttcatcggctacaaaggagaggcttgaactcgaagaggtgcattct
cgtgaaattaactttacgaagaaaatgagcaagcgtgtgaagttgcttgagcagcaaatt
catgatattcatgagcaacatatgagaaatacacaggctgaagaatctgagattgaggaa
cgaatgaagaaactgcaggatgatgttgatgtagcttgtagaagtgttgcaaggttgcag
gaggaagaacattcactatcagaaaagttatcggcagctaaaaatgctactaatgatatg
tctaaagagattgaagaaaatgaaagaagatatcgtgatttatgctcacagatgaatgag
tttcagcaacaccgaatgaacaaggtaacagcctttggaggaggaagagttctgaatctc
ttacaggttattgaaagacaccacagaaaatttaaaagccctcctatcggtccaattgga
gctcatgtgacattggtcagtggtgacatctgggccctagcagttgattgtgctgttggg
cggttactagatgcttttatagttaccgatcatagagattcacttcttttacgagattgt
gcaagagaagcaaactatgcaaaccttcagatcattatatatgatttttccagaccacgg
ttgaacattccaaactacatgcttccttcaacaaatcgtccaactattctttccgttata
cattctgacaatcctactataattaatgtgttggtggatataggcaatgttgagaggcaa
gtgcttgttcaagattatgagatgggaaaatctgttgcatttgatcagagaattcaaaat
ttgaaggaagtatacacttctgatggatatagaatgttttatagaggttcagttcagacc
acccttcctccaaacaaaagggccaggagtggccgactacgcagttctattgatgatgaa
atttacaatattcagaatgaagcctctaaggttaaagaacttgttcaagaaagcagaggt
aggaaaagagattctgaggaagcacttcgggatcttgaactcaatgtacagaatacgaag
aggcgacgaataaatgaagaaaagcttttgatgtcgaagcaactagctttgcgggatatg
aagaactcttatgcctctcagcaaaatgatgaccccgtgaatgttgaagagctttatcaa
gaaatctcgcaagtgcaagatgatttacaaggaaaggaaatgttactggagaaactccgt
ataaggatgaccatggcacaagagaaagccaataacttaaaaaattccatcgaggactta
tgtgagtcagcaaaaggagaaattgatgccattgaggttgccgagcgtgaattattgttg
gctgaagatgaactgcgcgcagcagaggctaagagaatccattatgaaggtgtcatgcaa
aacaaggtactacccgatattaaaacagcagaggcagagtatgaagagctccaacacaac
cgtcaggaaaactttaggaaggcttctatcatatgtcttgagtgtgaaatggaagcttta
ggaggctgtgctgggtatactccagagcaactaagtgcccgattaaacagattgaggcag
aggcttcagcatgagagccagaggtacaatgaatctattgatgatcttagagcaatgtat
gataaaaaggagcgcaaaattctaaagaaacagaatacctatgcaactttccgtgagaag
ttaaatgcatgccagaaggcacttgatttgcgctggagcaaattccagagaaatgcaaat
cttttaaaacgacaactaacttggcagttcaatggacatttgaggaagaaaggtataagt
gggcacattaaggtagattatgaacagaaggttttatctgtggaggtaaagatgcctcag
gatgcatctggcaacagtgttcgggatactagagggctttcaggtggggagcgctccttt
tccactctctgcttcgcattagctcttcatgagatgacagaagcaccatttcgagccatg
gatgagtttgatgtgtttatggatgctgttagtcgaaagatcagcttagatactcttgtg
gattttgcggtggcacaaggatcacaatggatattcatcaccccgcatgatatcagcatg
gttaagcctggggagaggatcaggaagcagcaaatggcagcacctcgtgggtaa
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