Phoenix dactylifera (date palm): 103716580
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Entry
103716580 CDS
T03274
Name
(RefSeq) TATA-box-binding protein 2-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103716580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pda03000
]
103716580
03021 Transcription machinery [BR:
pda03021
]
103716580
Transcription factors [BR:
pda03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
103716580
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103716580
RNA polymerase III system
TFIIIB
103716580
RNA polymerase I system
SL1/TIF-1B
103716580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
103716580
NCBI-ProteinID:
XP_038984882
UniProt:
A0A8B9AGG8
LinkDB
All DBs
Position
8:12479434..12494848
Genome browser
AA seq
228 aa
AA seq
DB search
MQIGSEQVWLHMAQYNLEGCQSVDLAEHPSGIVPTLQNIVSTVNLGCKLDLKIIALQARN
AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEEQSKLAARKYARVVQKVGFQAQ
FMDFKVQNVVASCDVKFPIRLERLALHHNAFCSFEPEIFPGLIYRMKDPKIVLLIFVSGK
IVLTGAKSRDQIKRGFEQIYPVVLEYRKVPQIGNEGKDSRDPVPRQLT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcagataggcagcgaacaggtgtggttacatatggcacagtataatttggaaggatgc
caatcggtggatcttgcagagcacccttcaggcattgttcccacccttcagaatattgta
tcaacagtcaacctgggttgtaagctggacttgaagatcatagctctacaagcccgtaat
gcagagtataatcctaagcgatttgctgctgttatcatgagaataagagagccgaaaaca
acggccctgatatttgcttctggtaaaatggtttgtacaggagctaagagtgaagagcaa
tcaaaactagctgcaagaaagtatgctcgtgttgttcagaaggttggctttcaagcacag
ttcatggactttaaagttcagaatgttgttgcctcttgtgacgtcaaatttccaataagg
ctagaacgtcttgcattacatcataacgcattctgcagttttgaaccagagatctttcct
ggcctgatctaccgaatgaaggaccccaagattgtgcttctcatatttgtgtcgggaaag
atagttctcacaggagccaagtcaagggatcaaataaagagaggttttgagcagatatat
ccagtggtcttggaatacagaaaagtcccacaaataggcaacgaaggtaaggactctaga
gatccagtgccacggcaattgacttga
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