KEGG   Phoenix dactylifera (date palm): 103716592
Entry
103716592         CDS       T03274                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin domain-containing protein DSK2a-like
  KO
K04523  ubiquilin
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103716592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pda04131]
    103716592
   03051 Proteasome [BR:pda03051]
    103716592
Membrane trafficking [BR:pda04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    103716592
Proteasome [BR:pda03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    103716592
SSDB
Motif
Pfam: UBQLN1 ubiquitin Rad60-SLD UBA STI1-HOP_DP UBA_7 Dsc3_N Ubiquitin_2 Ubiquitin_5 XPC-binding Rad60-SLD_2 TBK1_ULD RAWUL
Other DBs
NCBI-GeneID: 103716592
NCBI-ProteinID: XP_038974040
UniProt: A0A8B8ZIN1
LinkDB
Position
Unknown
AA seq 541 aa
VPKAIPAAQAIPCAAGSCGSATVHIRCSNGSKFSVQTSLDSTVEAFKAVVAGKCDVPAEQ
QRLIYKGRILKDDQTLASYGVESDHTIHLVRGAVPSSANTAASNLGASSTPNEGSGLGGA
GFGGSLFPGLGANGLAGLGGSGLSGIGFPELGQVQRQLTQNPNMMREIMNMPAIQNLMNN
PDLMRNIIMSNPQMREIIDRNPDLAHILNDPSTLRQTLEAARNPEIMREMMRNTDRAMSN
IEASPEGFNMLRRMYETVQEPFLNATTMAGDNDMGSNPFAALLGNQDVTHNRDRSPNPSA
TGSESVAGSPSPNTNPLPNPWSSNAEGPQPVNTRSTPASDTRAPGIAGLGGLGLPDLEQM
VGGVQDSTPSSQFMQNPAIMQMVQSLLSDPQYMNQILNFNPHMRGLLESNTQLREMLRNP
EFLRQLTSPETMQQLLSFQQSLLSRIGQQQSSQEQNQTGGGAGTPNNAGLELLMNMFGGL
GAGGLGVPNTSNVPPEELYATQLSQLQEMGFFDTQENIRALSATAGNVHAAVERLLGNLG
Q
NT seq 1626 nt   +upstreamnt  +downstreamnt
gtgccgaaggcgattccggcggcgcaggcgataccctgcgcggccggcagctgtggcagc
gccaccgtccacatccggtgttccaatgggtccaaattctcggtccagacatcgctcgac
tctaccgtcgaggcgttcaaggctgttgttgccgggaagtgcgacgtgccggccgagcag
cagcgattgatctataaaggtcggatcttgaaggacgaccaaaccctagcgagctatggc
gtggagtcagaccataccattcatttggtccgtggtgctgtgccatcatcagctaacact
gctgcatccaacctaggagcttcaagtactccaaatgaaggtagtggccttggtggagct
ggttttggaggctcactatttccaggccttggtgctaatgggctggctggattaggggga
tctggtttatctgggattggatttccagaacttggtcaggtgcaacggcagctaactcaa
aaccccaacatgatgagggaaataatgaacatgcctgccatccagaaccttatgaataac
cctgacttgatgagaaatataatcatgagcaatcctcaaatgcgcgagattattgaccgc
aatcctgatcttgcacacatcctcaacgatcccagcactctgcggcagacactggaagca
gcaagaaatcctgagatcatgagagagatgatgcggaacacagacagggctatgagcaac
attgaagcttctccagaaggatttaacatgctcaggcgcatgtatgaaaccgtacaggaa
ccttttctgaatgccacaacaatggctggggacaatgatatggggtcaaacccatttgca
gctcttttagggaaccaggatgtcacccataacagagatcggtcacccaacccatcagct
actggttcagaatcagttgctgggtctccttcgccgaacaccaacccacttcccaatcct
tggagcagcaatgctgaaggtccgcagccagttaacactaggtcaactcctgccagcgat
acaagggcaccaggcattgctgggttaggaggacttggtttaccagatttggaacagatg
gttggtggagtgcaggattctaccccatcgagtcaatttatgcaaaatccagccattatg
cagatggtgcagagcctcctttctgaccctcagtatatgaaccagatacttaatttcaat
ccccatatgcgtggcctattggaatccaatactcagttaagagagatgttgcgaaatcca
gaatttctacgccagctgacttctcctgagacaatgcagcaacttttgtcctttcagcaa
tcacttttatcccggattggtcagcaacagtcaagccaggaacaaaatcagacaggtggt
ggagcaggtacacctaacaatgcagggctggaattgctgatgaacatgtttgggggactt
ggtgctggaggtcttggtgttcctaacacctctaatgtgccaccagaagagctttatgca
acccagttgtctcaacttcaggaaatgggtttctttgacactcaggagaacatccgagca
ctgagtgccaccgctgggaatgtccatgctgcggttgagcggctccttggaaatctcggt
cagtag

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