Phoenix dactylifera (date palm): 103716743
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Entry
103716743 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103716743
04121 Ubiquitin system [BR:
pda04121
]
103716743
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103716743
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103716743
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103716743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-C3H2C3
zf-Nse
CxC4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
103716743
NCBI-ProteinID:
XP_008803097
UniProt:
A0A8B9AYV8
A0A8B7CNQ5
LinkDB
All DBs
Position
13:complement(12150829..12152683)
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AA seq
387 aa
AA seq
DB search
MATASSYWCYRCNRFVRVWPHDAIVCPDCDGGFLEEVETPPRFGAAAGEPRRLRFTVARP
YHQRSDLRFRRHRGTSAADRSPFNPVIVLRGPADGGGGDADRAPASSFELYYDDGAGSGL
RPLPESMSDFLMSSGFERLLDQLSQMDIHGIGGGRAWEQPPASKAAVESMPTVEIAASHI
KMDTHCAVCTESFELGTEAREMPCKHIYHQDCILPWLSLRNSCPVCRHEMPTDVRGRSGA
ETDGDEQTPMGGNEEDLVGLTIWRLPGGGFAVGRFSGGRRTGERELPVVYTEVDGGFNSS
GAARRISLASTRSRSRESGGIGRAFRNFISFFRRFRSSSFTSSRSTSDSGSAASPRHRRS
LVFSRSSRRHSSSWALEDGNIRAITRW
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcctcgtcctactggtgctaccgctgcaaccgcttcgtgagggtctggccc
cacgatgccatcgtctgccccgactgtgacggcggattcctcgaggaggtggagacccct
ccgcgtttcggcgccgccgccggcgagccccgtcggctccgcttcaccgtcgcgcggccc
taccaccagcgctccgaccttcgcttccgccgccaccgcggcacctccgcggccgaccgc
tcccccttcaacccggtcatcgtccttcgcggcccggctgacggtggcggcggggacgcc
gaccgcgcccctgccagcagcttcgaattatattacgacgatggggcgggatccggcctc
cgccccttgccggagagcatgtcggatttcttgatgtcttcgggttttgagcggctcctg
gaccagctctcccagatggacatccatggcattggcggtggccgggcgtgggagcagcct
cccgcatcgaaggctgccgtcgagtcgatgcccaccgtcgagatcgctgccagccatatc
aagatggacacccactgtgccgtctgcacggaatcgtttgagctcgggaccgaggctcgg
gagatgccctgcaagcatatctaccatcaagattgcatcttgccatggctttcgctccgg
aactcttgccctgtgtgccgccatgagatgcccactgatgtgcgtggaaggagtggggcg
gagacggacggtgatgaacagactcccatgggtgggaacgaggaggatttggtcggcctc
acgatatggaggctgccgggtggtgggtttgcagttgggaggttctcaggggggagaaga
acaggggaacgggagcttccagtagtttacacggaggtcgatggtggattcaactccagt
ggtgcagcgagaaggatctcgttggcctctacaaggagtcggtcgagggagagcggagga
attggtcgggcatttcgcaatttcatctcatttttcaggcgcttccgctcttcttccttc
acttcttcaagatcaacttcagattccggttccgctgcttctccgaggcaccgaagaagt
ttggtcttcagtaggagttcacgaaggcacagttcaagttgggcattggaagatgggaat
attagagcaattacaagatggtga
DBGET
integrated database retrieval system
