Phoenix dactylifera (date palm): 103716751
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Entry
103716751 CDS
T03274
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103716751
03015 mRNA surveillance pathway
103716751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103716751
03041 Spliceosome [BR:
pda03041
]
103716751
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103716751
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103716751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103716751
NCBI-ProteinID:
XP_008803112
UniProt:
A0A8B7CNQ9
LinkDB
All DBs
Position
13:12261482..12271666
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AA seq
896 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELDHLVDMTKVKMDVIRPWIATRATELL
GFEDEVLINFVYGLLDGKEVDGKQIQIQLTGFMEKNTGKFMKELWALLLSAQNNASGVPQ
QLLDAKKEETDRRKAETDRIAQEIQKRKEKVGRELEQEKQRGMDGAAEKSRSANADSGSV
SKRSPPRASSVHPEEDREADMGHHSRSKSWQTPSPSKSFNKSFSKSGSYSKGGWKSRSIS
VSSQSQRSNSPKRRYRSPPRRSISSERRYITPPRRSISPSHRHSPRYNRSPLRRRSPRTR
RRSVSLSRNRSPSPIRRRSPYARKRSPSYVQRGSPSSSRRSAVQVRRRSPSPLHHRSPIR
RRSLSLVRRRSPFPLRRRSPPPRSPKHRRRSPLHSPRSRVVDCQASPWQRKRSRSPYRSQ
SPPYPTRRSTSREIDNRINGINSRHYRGGYTSQRSREKRSPLHHALDRKVAERTDSVHKV
SQLHRFPISRSTQRDSRNQNNIHDRECGAASDESPSPSESPSHLRRMDPRGNRSRSLSES
PVKQPGRQIPPRDRPETSRDRDPLSHAREDAYHRVDSSCKNSRGSPANVQQKDYHAKDFG
PEEYSSDRLADDCSPVSQGRAVSLENRKKDYEKKSEEDLPERHKQLVSQSPEGIEYGPGR
IVDESYAPDNAYDREQSSKEHARDASSSEKRVSDEQAVKNPYGDGYAVKAERQSHAKSNE
YRESHYDIESVKKSRKKVVRSNCLDIHDLDSEETDTHRYREMEKQRHKKSSKHKRDLDDS
SESDSQIDDKKEAKRRRKDEKRQRKEERRLRREERHRRKLERRAGKLKVKSIDTVTPPSD
LEKNHNDADESDGDAAIRKGPHLSYTEETLLEQKKLEIELREKALESLRAKKAINH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattcttccggggaacctcggcggatcaggatactcgcttctccaacaag
caggcgaagcttttgaagacacaaaaattcgcgccggagctcgatcatctggtggatatg
acgaaggtaaagatggatgtgataaggccatggatcgcaaccagggcgacagagctcctt
gggttcgaagatgaagtcctcattaactttgtatatggacttctggatggcaaggaggtg
gacgggaaacagatccagatccagctcactgggttcatggagaagaatacagggaagttc
atgaaggagctttgggctctactgctcagtgctcagaataatgccagtggggttcctcag
cagttattggatgcgaagaaagaggaaacagataggagaaaggcggagactgatagaatt
gctcaggaaattcagaagagaaaagagaaagtgggaagagagctggaacaagagaaacag
agggggatggatggggcagctgaaaagtcaaggtctgctaatgctgattctggttcagtt
tcaaagcgatcaccgccaagggcttctagtgttcaccctgaagaagatagagaagcggac
atggggcatcattcaagatcaaaaagctggcagacaccttcaccaagtaagtcattcaac
aaatcattttcaaaatctgggagctactcaaagggaggttggaaatcaaggagcatatct
gtttcatctcagtcacaaaggtcaaactctcctaagaggcggtatcgctcaccacctaga
cggtctatatcttctgagaggcgatacataactccacctcgacgttccatttctccaagc
cataggcattcaccacgatacaatcgatcacctttaagacgaagatcgcctcgtactagg
cgaagatcagtttccttatctaggaatcgatctccctctcctatccggcggagatctcct
tatgcacgaaaaagatctccatcatatgtgcaacgtggttctccttcctcgagtcgcagg
tctgcagttcaagtccgcaggagatcaccttctcccttacatcacaggtctcctatccga
cgcaggtctttgtcactagtaaggcgcagatccccatttcctttaaggaggagatcacct
ccacctaggtctccaaagcaccgaaggaggtcacctctgcattcgcctagaagtcgtgtt
gtggattgtcaagcatctccatggcaaagaaagaggagccgcagtccatataggagccag
agtccaccatatccaactcgtaggagtacgagtagggagattgataaccgtattaatggc
atcaactctagacattatcgtggtggatacacatctcaaaggtctcgtgaaaagaggtca
cctcttcatcatgccttggataggaaggtggctgaacgcactgactcagtacataaggtt
tcacaattacaccgatttccaatttcaaggtctacccagcgtgattcaaggaatcaaaac
aatattcatgatagggagtgtggtgcagcatcagatgaatctccaagtccatcagagtca
ccatcccatttgcgaaggatggatccaaggggaaatagatcccgtagcctttctgagagt
cctgttaaacaacctggaagacagatacctcctcgtgacagacctgaaacaagtagagac
agggatcccctgagtcatgccagggaggatgcttatcatagggttgattcctcatgcaag
aacagtagaggttcacctgctaatgtgcagcaaaaggattaccatgctaaggacttcggt
ccagaagagtattcttctgatagattggcagatgactgctctccagtttcccaaggtcga
gctgttagcttggaaaatagaaagaaggattatgagaaaaaaagtgaagaagatcttcct
gaaagacataaacaactagtatcacaatcaccggagggaatagagtatggtcctggaaga
atagtggatgaaagctacgcaccagataatgcttatgatagagagcaatcgtctaaggaa
catgcaagagatgcatcctcttcggagaaaagggtatctgatgagcaggcagtgaagaac
ccttatggagatggttatgcagttaaagctgagagacaatcacatgcaaaaagcaatgaa
tatagagaatcacattatgacatagaatctgttaagaagtccagaaaaaaggtagtccgg
agcaactgtttggatatccatgatttggactctgaagaaactgatacacatagatatcgg
gagatggaaaagcaaaggcacaaaaagtcatctaagcataaaagggatttggatgacagt
tctgaatctgattctcagatagatgacaagaaggaggcgaagagaaggaggaaagacgag
aaaaggcaacgcaaggaggagagacgtctaaggcgtgaagagaggcatcggaggaagttg
gaacgtcgtgcaggcaaacttaaagtgaaatctattgatactgttactcccccatcagat
ttggagaaaaatcataatgatgctgatgaatctgatggtgatgctgccataagaaagggt
cctcatctaagttacacagaagaaacattgttagagcagaagaagcttgagattgagctg
cgagagaaggccctcgaatctctcagagcaaagaaggctatcaatcattaa
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