Phoenix dactylifera (date palm): 103716829
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Entry
103716829 CDS
T03274
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04120
Ubiquitin mediated proteolysis
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103716829
04120 Ubiquitin mediated proteolysis
103716829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103716829
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103716829
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103716829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
MscS_porin
zf-RING_5
zf-RING_11
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
103716829
NCBI-ProteinID:
XP_008803227
UniProt:
A0A8B7CNZ2
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MVRLQTYAGFSFLATITAIYYAFNSRGQFYPAMVYLSTSKICFVLLLNMGLVIMCIMWQL
VKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA
QKRVEYIEMTPSVPMLSHIRVVSFMGFLLILDCLFLYNSLKSLIQTRQASVALFFSFEYT
ILATTTVSMFVKYVFYVSDMLMEGQWERKAVYTFYLELVRDLLHLSLYIFFFLVIFLNYG
IPLHLIRELYETFRNFRIRVADYIRYRKITSNMNERFPDATPEELNASDATCIICREEMV
TAKRLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENRPAGSRQQGAPSEFRQTGPAVA
GTSTQDPDSCEVGDNISQHQKRLRAAALAASLYEKSFAPANTVVWSSDYALQPQMNIPQM
EKQSTGEAAASGQPQQHQPPFQSQYTSTSMPSQAPNSSVTFHQNSAGNPDLQHSLLKAQE
NLIQSQIEFLQAQLQYLQQQQKADHKVNCGDAVPAATDYKGKAVAASNSSASMADCGRHG
EMEDADTD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctccaaacatatgctgggttcagtttcctggccaccattacagcaatatat
tatgcatttaacagcagagggcaattttacccagctatggtgtatctctccacctcaaag
atctgttttgtgcttcttttgaacatgggtctggtcatcatgtgtataatgtggcagtta
gtcaagcgtttgtttcttggttctcttagagaggcagaagttgagaggttgaatgaacaa
tcgtggagggaggttatggagatcctttttgctatcaccatattccggcaagatttttct
gtatcttttcttgcaatggtaacggctcttctattgatcaaagccttgcactggttggct
caaaagagagttgaatatattgagatgactccatctgtacctatgctgtctcacattcgc
gtagtatctttcatggggtttcttctcattctagattgtcttttcttgtataattctttg
aagtccttgatacagacacgacaagcatcagttgctctcttcttttcatttgaatataca
attctagcaacaacgactgtgtcaatgtttgtcaaatatgttttctatgtgagtgacatg
cttatggaagggcagtgggaaaggaaggctgtctatactttttacctggaacttgttcga
gaccttcttcacctgtctctgtatatattcttcttcctagtcatcttcttgaactatggt
atcccattgcacttgattcgtgagctctatgagacattccgcaatttcagaatccgtgtt
gctgattatattcgttatcgcaaaatcacatcgaatatgaatgaacgcttcccagatgca
acaccagaggagcttaatgcaagtgatgcgacatgcataatatgtcgtgaggagatggtg
acagccaagaggttggtctgtggacacctttttcatgtgcattgcctaagatcttggtta
gagcggcagcatacttgccctacatgcagagccttggttgttcctcctgaaaacaggcca
gctggatctcgccaacagggagctccatcagaatttcgtcagactggacctgcagtggct
ggcacatctactcaggaccctgacagctgtgaggtgggtgacaatataagccagcaccag
aaaaggcttcgagctgctgccttggctgcttcattatacgagaagtcatttgctccagca
aacacagtcgtctggtcttcagattatgctttgcagccccagatgaatattccacaaatg
gagaagcaatcgactggtgaagcagcagcttctggacaaccgcagcagcaccaacctccc
tttcaaagccaatacacttcgacatccatgccttctcaggcacctaactccagtgttact
ttccatcagaattcagctggcaatccagatctgcaacattcactattgaaggcacaggaa
aatcttattcagagtcagattgagtttctgcaagcccagctgcaatatctacagcagcag
cagaaggcagatcataaggtgaactgtggagatgcagttcctgctgccactgattacaag
ggaaaggctgttgctgcgtcaaattcttctgcatctatggctgattgtggtcgacatggg
gagatggaagatgctgacacggattaa
DBGET
integrated database retrieval system
