Phoenix dactylifera (date palm): 103716995
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Entry
103716995 CDS
T03274
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103716995
Membrane trafficking [BR:
pda04131
]
Protein recycling
Others
EARP complex
103716995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
RB_B
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
103716995
NCBI-ProteinID:
XP_017700664
UniProt:
A0A8B7MW30
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Position
2:complement(21903649..21959661)
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AA seq
1129 aa
AA seq
DB search
MQRDTSGIPSFLDGGRPTQEFESPGPLLFLSLLFLQGGGMDLSRVGEKLLSSVRSARSLG
LLPPASDRPEVPARAAAAAAVARALAGLPPHQRTILPSNSGELVSIYSSRSQDLVIEELE
EDFYQEDFDPVRHILENIPSEENDVTYFDQKSTLRLAQLDRIAEQLSQHVMEHHEEMVKG
MQLVMELEQDLKVANVICMNGRRHIALSMQEVSRDLVVNSHSKKKQALLDMLPILTELRR
ALDMQMELEALVENGNYFQAFQLLPEYLQVLENYSELSAIQEMGLGVEAWLGRTIQKLDS
HLLGVCQMFKEESYITAVDAYALMGDVAGLAEKIQSFYMQEVLSRTHSVLKDVVQEEIGN
TMQRSRFTYSDLCVQIPESKFRQCLLKTLDTLFKLMCSYYSIMSFRLEEKDFEPQALNYE
LKKSNTSQCLEGIVVDLESRVSSNSVVRNEFKSESVPKMEDFDSTNSSSVVGVSENLGST
SSNSCTSSTERSDVETATARSDSPFYKLRKDTTAFVAHTLERGRKNLWQLITSRLSVLLS
CSAICSTSNYQFLRNYEDLNVFILAGEAFCGVEAADFRQKLKVVCENYVAAFHRQNVYAL
KMVLEKESWVKMPAEALQVISLAGLIGDGAPLIVPSVGNANISSALHSKKMYDPTFTGKQ
NNGFACWLKSENLFSSKLASGSKESPKAHLLFNGSMASDLADGHAVDLLHNNSMSAKGHS
GINGSSSLMEDENEDLLADFIDEDSQLPSRISKSRPARKNFANWNDEEVSAQTGSSLCLL
RLMDKYARLMQKLEIVNVEFFKGICHLFGIFYLHTFETFGQQDINQSGKSLPDTLSSRLK
TALSKIMQDYDMWIRPQNVACSPSSPMSLNTAFTHMDVMPTIPPSTMFGQAPSTSFGLKE
RCAGAETISLVARLLYRSRTHLQSMLLQHNATMVEDFFGNLVDSVPDLSEHIYRTTAHLL
LHINGYADRIANAKWEVKELGLEHNGYVDLLLGEFKHYRTRLAHGGISKEVQDLLLEYGL
ENVAEVLIEGLSRVKRCTDEGRALMLLDLQVLINGLQHFVSINVKPKLQIVETFIKAYYL
PETEYVHWARSHLEYSKSQIVGLINLVATMKSWKRKTRLEVLERIETGV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggatacgtcgggaatcccctcgttcctcgacggcggccgtcccacccaggag
ttcgagagcccgggccccctactgtttctttccttgctcttcctccagggcggagggatg
gatctgtcccgggtcggcgagaagctcctcagctccgttcgctcggccagatctctgggt
ctcctgcccccggcgtccgatcgtccggaggttccagctcgggcagcagctgctgctgct
gttgctcgtgcccttgctggacttcccccacatcaaaggactatccttccatcaaattct
ggagaattggtttcaatctatagcagtagatctcaagatctagttatagaagagcttgag
gaagacttctatcaagaggattttgatccagtgaggcatattctggaaaatattccatct
gaagaaaacgatgttacttattttgatcagaagtctactcttcgattggcccagctcgat
aggatagcagaacagttgtcacaacatgttatggagcaccatgaagagatggtgaagggg
atgcagttggtcatggagttggagcaagatttgaaagttgccaatgtcatctgcatgaat
gggagaagacatatagccttgtcgatgcaagaggtttcaagggatcttgttgtgaactca
cattcaaaaaagaaacaagctctattggacatgcttccgattctaacagaacttcgtcgt
gcattagacatgcaaatggaacttgaagcactagttgagaatggaaactactttcaggcg
tttcaattgttaccagagtacttgcaagttttggagaattattcagaactttctgctatt
caagaaatgggactcggtgttgaggcttggttaggaaggacaattcaaaagctagattca
cacttactaggagtttgccagatgttcaaggaggaaagctacataactgcagttgatgct
tatgcattgatgggggatgttgctgggcttgctgaaaaaatacagagtttttatatgcaa
gaagttctctccagaacacattctgtactgaaagatgtggtacaagaggaaattggaaat
actatgcagagaagtagatttacttacagtgatctctgtgttcaaatacctgaatccaaa
tttcgacaatgtttgttaaaaaccttggataccctatttaagttgatgtgttcatattat
tctatcatgagctttcggctggaagaaaaggattttgaaccccaagcactaaactatgag
ttgaagaaaagtaacacatctcagtgcttagaaggaattgtagttgatttggagtcacgg
gtatcaagcaattcagttgtacggaatgaatttaaatctgaatctgtgccaaaaatggaa
gactttgattcaacaaatagttcatctgttgttggcgtaagtgaaaatctgggatcaaca
tcttcaaattcttgtacatcatctacggagagaagcgatgttgaaactgctacagcaaga
agtgattctccattttataagctgagaaaagataccacagcatttgttgcacatacatta
gagagagggagaaaaaatctatggcaacttataacaagtcgtttatctgtcttgctttcc
tgttctgctatctgctcaactagcaattaccaatttctgaggaactatgaagatcttaat
gtatttattttggctggtgaagcattctgtggagtggaagctgctgatttcaggcaaaaa
ttgaaagttgtttgcgaaaattatgttgcagcctttcatcgtcaaaatgtttatgcactt
aagatggtcctggagaaagaatcttgggtgaaaatgccagcagaggcactacaagtaatc
agtttggctggtcttattggtgatggtgctcccctgattgttccttctgttggtaatgct
aacatatcgtcagcacttcactctaaaaaaatgtatgatccaacatttactggaaagcag
aataatggatttgcctgttggcttaagtcagaaaatttattttcttcaaagctggcatcg
ggctctaaagaatcaccaaaagctcatttattattcaatggatcgatggcctcagattta
gctgatgggcatgctgttgatctcttacataataacagtatgtctgcaaagggtcattct
ggtataaatggaagtagttctcttatggaggatgaaaatgaagatcttcttgctgacttt
attgatgaggatagtcagcttcctagtcgaatatctaaatcaagacctgctagaaaaaat
tttgctaattggaatgatgaagaagtttcagcccaaacgggatcttcactttgtctgcta
aggttaatggacaaatatgccaggctcatgcagaagttggaaatagtcaatgttgagttc
ttcaagggcatctgtcatctgtttgggattttttatcttcatacttttgagacatttggc
caacaggacataaatcaaagtggaaaatccttaccagatacgctatcttctcggcttaaa
acagccttatcgaaaattatgcaagattatgacatgtggatcagaccccaaaatgtagca
tgttcaccctcatcacccatgtcattaaatacagcattcacacatatggacgtaatgcct
actataccgcctagtaccatgttcgggcaagccccaagtacttcatttgggttgaaggaa
agatgtgcaggtgctgaaacaatatcactagtcgcacgactattgtatagatcgagaact
catctccagtcaatgctattgcagcacaatgcaacaatggttgaagatttttttggtaat
ctggtagattccgttccagatctctctgagcatatttataggacgacagcacatctgctt
ctacatatcaatgggtatgcagataggatcgcaaatgcaaaatgggaggtgaaagagctt
gggttagagcacaatggatatgttgacttgttattgggagaatttaaacattataggaca
aggcttgcacatggtggaatctctaaggaggttcaggacctcctcctagagtatggactt
gaaaatgttgcagaagtacttattgaaggcctatcacgagtaaagagatgcactgatgaa
ggacgagccttaatgttattagaccttcaggtcttaattaatggactacaacactttgtt
tccattaatgtgaagccaaagctgcaaatcgttgaaacatttatcaaggcctactatctt
ccagagactgaatatgtgcactgggcacgatctcatctggaatacagcaaaagccaaatt
gtaggattaattaaccttgttgctactatgaaaagttggaaaaggaagacaaggttggaa
gtcctagagagaattgaaactggcgtttag
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