Phoenix dactylifera (date palm): 103717108
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Entry
103717108 CDS
T03274
Name
(RefSeq) uncharacterized protein LOC103717108
KO
K19022
AP-5 complex subunit beta-1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103717108
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
103717108
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
103717108
NCBI-ProteinID:
XP_008803596
UniProt:
A0A8B7CPG4
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Position
17:complement(13331087..13337869)
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AA seq
1125 aa
AA seq
DB search
MEKQASGRHPPAGAPPPLQLSPQDWETLIDDFQSGVHGRFARWLSLPLLDLALHALLRRD
FPSALKPHLLIFLEDSFPLLPLPSPAAALPPLLDALRALLQSPSPDAAAVRDQAILSATA
VAVAALPSPLPPSAASHLESLTEVLLAVANRPNHGPDRLSRALACESLRELERANPLLLS
DVAGHLWVLAQAERTHAAQSYLLLLAAVVRNIALHGLLSSPSSVLSTSTPLVPFSAPQSL
FSPPDPYREPSDLNVREIRRVMAFLLERPHALTPPATMELVSMLTSIAGVLEQSVPVVTA
LLKVQFSGLLYSYDPILCHVVLMLYSRFSDAFTGEDERGITRRLALVARETHHPLIFRLL
ALHWLLGLPRLGHGRASLAPLAPNFYPTVFDPLALKAKKLDVLSCIAASLDVSKGEGKGE
EEEKEGRRPEVVKLFEDGLVCVSAFKWLPPRSTETSVAFRTLHTFLIGVAPHPSGSSENS
EIGVLMQSTIFHTVQSMLVSLALEHHGLVPVIATFVDRLLACKAHRQVGEWLLQTLDEHL
LPKLESGYRLASYFPIFERIAESDMIPPRGLLELLTRHMVTLSDKHGPDTWLRSWSQGSK
VLGICRTMLKHHHSSRVFLALSHLLAFTCQFFPDLEVRDNARIYLRMLLCIPGKKLRHIM
NLGEQPSGVSPSPHPGSLFQVPSPRHSQDLKKSVGVSSYIHLERVIPLLVKQSWSLTLPN
LSNGDTKSSHVEGIKDTSATPSTELEGEGEVNIERIILPKEPLRVMDSKVAEILGVLRRH
FACIPDYRHMPAIKIRIACRLRFDSEPFTRVWGAASFALDSEEVDGLPALYATTITFSST
SKYGSIPPCRVPFLLGEPSRTGFDIVPVDNSCEEEDSSFCASVMIELEPREPVPGLIDVA
IKANAENGQIISGSLQSITVGIEDMFLKAGIPPDITEDGVPEYCMDLFHALWEACGNSAN
TGRETFPLSGGKGAVAINGTQSVKLLEVLADSLIRAIERYLAPFVVSVIGSPLVNVVKGN
EVIRDVVWGEDSENFAGSNVGALVPYSDNVLLGLPYAEEESDADNPPQVSKRNMGTFLVL
IFLPPRFHLLFQMEVSDASTLVRIRTDHWPCLAYVDEYLEALFLT
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaggcctccggccggcacccgccagcgggggcgccgccgccgctgcagctc
tccccacaggactgggagaccctcatcgacgacttccagtccggcgtccatggccgcttc
gcacgctggctctccctccccctcctcgatctcgccctccacgccctcctccgccgcgac
ttcccctccgccctcaagccccacctcctcatcttcctcgaggactcgttccccctcctc
cccctcccgtcccccgccgcggccctccccccactccttgacgccctccgcgccctcctc
caatccccatcccccgacgccgccgccgtccgcgaccaggccatcctctccgccaccgcc
gtcgccgtcgccgccctcccctctcccctccccccctccgccgcctcccacctcgagtcc
ctcaccgaggtcctcctcgccgtcgccaaccgccccaaccacggccccgaccgcctctcc
cgcgccctcgcctgcgagtccctccgcgagctcgagcgtgccaatcccctcctcctctcc
gacgtcgccggacacctctgggtgctcgcccaggccgagcgcacccacgccgcccagagc
tatctcctcctcctcgctgccgtcgtccggaacatcgcccttcacggtctcctctcctcc
ccctcttccgtcctttccacctccacccccctcgtccccttctccgccccccaatccctc
ttctcccctcccgacccctatcgcgagccctctgatctcaatgtgagggagatccggcgg
gtgatggcattcctcttggagcggccgcacgccctcaccccgccggcgaccatggagctt
gtgtcgatgctcacgagcatcgccggcgtgctggagcagagcgtgccggtggtgacggcg
ctcctgaaggtgcagttctctggcctgctttactcctatgaccctatcctctgccatgtt
gttctcatgctgtattcccgcttctcagatgctttcaccggggaggacgagcggggcatc
acccgccgccttgccctcgttgccagggagacccaccatcccctcatcttccgtcttctt
gctctccattggctccttggcttgccccggcttggccatgggagggcctcccttgccccc
ctggcacccaacttttacccgaccgtgtttgatcccctcgcgctgaaagctaagaaattg
gatgtcctctcatgcattgctgccagtcttgatgtttccaaaggggaggggaagggggag
gaggaggagaaggagggtcgaaggccggaagtggtgaagctctttgaggatggattggtt
tgtgtctcagcgttcaaatggctaccaccaaggagcaccgagacctcggtggcctttcgc
actcttcacacgttcttaattggagtcgccccacatcctagcggcagctcagagaattct
gaaataggagttttgatgcagtctaccatcttccacacggttcagagtatgttggtgagt
ttggcattggagcatcatggattagttccggtgattgctacttttgtcgaccggttgttg
gcatgcaaggcccataggcaagtaggtgaatggctgcttcagacactcgacgagcatttg
ctcccaaaacttgaatcgggctaccgattagcttcatacttcccaatttttgaaaggatt
gctgagagtgatatgataccacctcgtggtttgttagaattgcttaccaggcatatggtt
actctttcggataaacatggccctgatacttggttgagatcatggtctcagggaagcaag
gtattgggcatttgcaggacgatgcttaagcatcatcacagctccagagtgttccttgct
ctgtcacacctcctggcattcacttgtcagttctttccggacttggaggttcgtgacaat
gctaggatttacttgcggatgcttctctgcattcctgggaagaagttgaggcacataatg
aatctcggtgaacagccttcaggagtctctccttctcctcaccctggctcactctttcaa
gttccatcaccccgtcactcacaagatctcaagaaatcagttggagtgtcttcttatatt
catcttgaaagagtcattccattgcttgttaaacagtcgtggtcactaacactacctaat
ttgagtaatggagacactaaatccagtcacgttgaaggaattaaggacaccagcgccaca
ccttctacagaactggagggggagggtgaagtgaatatcgagaggatcattttgccaaag
gaaccattgcgtgtgatggattctaaggttgcagaaatattaggagtcctgcgaaggcat
tttgcatgcattccggactaccggcacatgcctgcgattaagataaggatagcctgtaga
ctgaggtttgattctgagccattcactcgtgtgtggggagctgcttcatttgctttggat
tcggaagaggtagatggattgcctgctctatatgcaactacaatcactttttcatcaaca
tcaaaatatggttctattccaccttgccgtgtaccgtttcttttaggtgaaccttcaaga
actggatttgatattgtgcctgtggacaatagttgtgaggaggaagattcaagcttttgt
gcctcggtaatgatagaattggaacctcgagagccagttcctggtcttattgatgtagcc
atcaaagcaaatgcagaaaatgggcaaattatctctggctcacttcaaagtattacagtt
ggtattgaagacatgttcctcaaggctggcataccacctgatattacagaagatggggtt
ccagaatactgcatggatctgtttcatgctttgtgggaggcttgtggtaattctgctaac
acaggacgggagacctttcctctgagtggaggtaaaggggctgtggccattaatgggaca
caatcagttaagcttctggaagtactcgcagattctttgattagagctattgaaaggtat
ctggctccctttgttgtaagtgtcattggcagccccctagtgaatgtcgtgaagggtaat
gaggttatcagagatgttgtctggggagaggattctgagaattttgctggcagtaacgtt
ggtgccctggtaccatattcagacaacgtacttcttgggcttccatatgctgaggaagaa
agtgatgcagataatcctccacaagtcagtaagaggaacatgggtacttttcttgtttta
atattcctgcctccgcggttccatctccttttccagatggaagtaagtgatgcttcgaca
ttagttcgaataagaactgaccactggccatgtcttgcttatgtggatgaatacttggaa
gctttgtttctaacatag
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