Phoenix dactylifera (date palm): 103717331
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Entry
103717331 CDS
T03274
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103717331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103717331
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103717331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
103717331
NCBI-ProteinID:
XP_008803880
UniProt:
A0A8B7CQ17
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MRTRSQSKRKESPPAPRNSEPQTSLAHGSGHGKGEASVKKSKRAASRKASGGKRRQESPS
LLEGTEVEVEVPGENSGQVRVKEVLLCDLGLKGCSSQKMEGSTSSRGKDVGGKVHLDVNE
MDWEEGTISVSEGREGYSHDLGRVVTVEFTDSPSTAQRRASRRASAEDKVLAELVHKVHL
LCLLARGRLVDSVCNDPLIQASLVSLLPSNLLKIVEVPKLTASTLNSLVNWFHNNFHVRN
HNIERGSFKSNLSFALETREGTAEEVVALSVALFRALNLTTRFVAVLDVASLKPDADIPG
GSSQDAERLDTRIFSSSTVASPYQVNAPYPAVSMDDANKYMADKVCQREKHHKKENSSTC
KKNLLKGIGAACNSDDGTSDASASKACSDNLNSCVISCAEKSKRKGDLEFELQLDMALSA
TLAGIRENVGLDTIDIPSTASSIASPLKKMRKIKSEESPILTHGSSSAVWSRRTGPPLYW
AEVYCSGETLTERWVHVDAANGIVDGEEKVEAAVAAFRRPLKYVIAFAGNGAKEVTRRYC
KHWYKIASQRISSQWWDTVLAPLKELESGATGGIVQLEAIQEKVPYDPGKKEPPAEQTQI
STRNSLEDMELETRALTEPLPTNQLAFKNHHLYALEKWLNKNQVLHPKGPVLGYCSGHPV
YPRSCVQTLQTKQRWLREGLQVKPNEIPAKVVKGSKKVINFQTSEPSVLEEDIEEPTLEL
YGKWQLEPLQLPHAVNGIVPKNERGQVEVWSEKCLPPGTVHLRLPRLIPVAKRLEVDFAP
AMVGFEYRNGRCFPMFEGIVVCREFKDAIMEAYAEEEERREAEERKRNERQALSRWFQLL
SSIITRQRLKNSYVERVPHDSPTDQKNDNFVSQKYSHEIDLTTIGSQQGSIQQNARAVLP
SVQDHEHVFPIECQSFDEESFVRTKRCPCGFSIQVEEL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaagccaatccaaacgtaaagaaagcccgccggctccgcgcaattcagag
ccccagaccagtcttgctcatggatcaggtcatggaaaaggggaggcctctgtcaagaag
tcgaaacgggctgcctctcgcaaagcttccggtgggaaacggcggcaagaaagccccagc
ttgctcgagggaaccgaagtcgaggtagaggtaccaggggaaaacagtggtcaagtgcgt
gttaaggaagtgcttctttgtgatttaggtctgaagggatgtagtagtcagaaaatggaa
ggaagcacatcaagtagagggaaagatgtaggagggaaagttcatctggatgtgaatgaa
atggattgggaagagggtactatttctgtttcggaaggcagggaaggctactcccatgat
cttgggagggtggtgactgttgaattcactgattcaccatctactgctcagaggagggct
tctcgcagggcttctgcagaagacaaggtgctagccgaacttgtgcacaaggtccatttg
ctttgtctactagcacggggtaggttagtcgacagtgtctgcaatgatcccctcattcag
gcttccttggtttcacttttaccatcaaacttactgaagatagtggaggttccaaaactg
acagctagtacgttgaactccctcgtcaattggtttcataataatttccatgtacgaaat
cacaatatagagaggggatcctttaagtcaaatctttcctttgctcttgaaactcgtgaa
gggacagcggaggaggttgttgcattgtcggtggccttatttagagctctcaatttaaca
actcggtttgtggctgttctagatgtggcctctctcaagccagatgctgacatacctggg
ggctcaagccaagatgcagaaaggttggacacgaggatattctcttctagtactgtggca
agtccttatcaggttaacgctccatatcctgctgtttcaatggatgatgccaacaaatac
atggctgataaagtttgccaaagagaaaagcatcacaaaaaagagaacagttcaacctgc
aagaagaatttgcttaaaggtataggtgctgcttgtaattcagatgatggaaccagtgat
gcatcagccagcaaagcatgcagtgacaacttgaattcttgtgtcatcagttgtgctgaa
aaatcaaaaaggaaaggggatctagagtttgaattgcagttggacatggctctttcagcc
actttagcaggaattcgagaaaatgtaggtttggatacgattgatatccctagcactgca
tcatctatcgcttcccctttaaaaaaaatgaggaaaatcaaaagtgaagaatctccaatt
ctgactcatggtagttctagtgcagtttggtcaagaagaacaggacctcccttgtactgg
gcagaagtctattgcagtggggagaccttaactgaaagatgggtgcatgttgatgcagca
aatggtatagttgatggtgaagagaaagtagaagctgctgttgctgctttcaggagacca
ttgaaatatgttattgcttttgctggaaatggtgctaaagaagtgactcgcaggtattgc
aagcactggtataaaattgcttcgcaacgaataagttcacagtggtgggatacagtcttg
gcaccattgaaggagctggaatcaggtgcaactggaggaatagttcagttagaagcaata
caagagaaggtcccatatgacccagggaaaaaggaacctccagctgagcagactcagatt
tcaaccaggaattctcttgaggacatggagcttgaaactagggcattaactgagcctctt
ccaaccaatcaactggcctttaaaaaccaccacctctatgccctagaaaaatggcttaac
aagaatcaagtactccatccaaagggtcctgtacttggttattgttcaggtcatcctgtc
tatcctcgatcttgtgttcagacgctacaaacaaaacaaagatggttgcgggagggcttg
caagttaaaccaaatgaaattcctgccaaggtagtgaaaggttccaaaaaagtaattaac
ttccagacatctgaacctagtgttcttgaagaagatattgaggaaccaaccttagaactt
tatggaaagtggcaattggaacctttacaacttcctcatgctgtaaatggtattgtgcca
aagaatgagcgtggtcaagtggaggtatggtccgagaagtgtcttccacctggcacggta
cacttgaggttacccagattgattccagttgcaaagaggcttgaagttgattttgcacct
gccatggttgggtttgaatatcgtaacggccgttgctttcccatgttcgaagggattgta
gtctgcagagagttcaaagatgctatcatggaggcatatgctgaagaagaagagaggaga
gaagctgaagaaagaaagcgcaatgaaagacaggctctctcaaggtggtttcagctactt
tcctccattataaccagacagagattgaagaactcttacgtggagcgcgtccctcatgac
tcccccaccgaccaaaagaacgacaattttgtttcccaaaaatatagtcatgaaattgac
ttaacaaccataggatcacagcaaggatcgatacaacaaaatgcaagggcagtcttgcca
tctgttcaggatcatgagcatgtcttccctatagagtgccagagctttgatgaagaaagc
tttgtccggacaaagcgatgcccatgtggattctctattcaagtggaagagttgtag
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