Phoenix dactylifera (date palm): 103717625
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Entry
103717625 CDS
T03274
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103717625
Enzymes [BR:
pda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
103717625
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103717625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
TRM5-TYW2_MTfase
Kelch_HCF
Beta-prop_TYW4
Kelch_2
Kelch_FKB95
TYW2_N_2
NANM
Beta-prop_Calicin
Trm5_N
Motif
Other DBs
NCBI-GeneID:
103717625
NCBI-ProteinID:
XP_038981937
UniProt:
A0A8B9A8A3
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All DBs
Position
4:complement(25883571..25897118)
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AA seq
1125 aa
AA seq
DB search
MEFEKRKAQALAAMAAPRPDKSPKGTVDAPIVPLLDAINRHPSFFTTSSCSGRISILAHR
TNPPPSSADATAGNPKLEAAAPKKKKKAGGGGWLFVSHDSADPEAIVDLLFGDRRDSEGG
DLVFRFEPLIVAVECRDLASAQSLVSTAISCGFRESGMTSIQKRIMVAIRCSIRLEVPLG
QIGFIMISPEYVRYLVRIANDKMEANRKRTDGFLHVLQSKVLPGPGKEVIDSNKKGLEQI
ADKGFSLDFETKPNVVLSEISIENGTSKSHTEDNILGFIKDRCDSEPAGYSGEDKCAVAS
CKNSLKVSDPLHDKEIGYSHKEIADKDSNIELSGTPKCFLSVVMLKIVGEPIEKLFLWGQ
SACASNNGGQEHILVFGGFGGVGRHERRNCSLVLDPQSGLLSEINSTKPPSPRLGHTASM
VGREIYVIGGRGGPSQILNDVWVLDTTENRWSLLECTGSAFNPRHRHAAAAVGSNIYVFG
GLNNEVIYSCMNVLNTQTLQWSNVSIQGDWPCARHSHSLVASGPQLFMFGGYDGEKALGD
LYSFDVRTLQWRKEETSGRAPSPRFSHSMFIYKNYLGIIGGCPVRQQYQELALLNMHHLV
WMHVTIDSLGGDLWVRSSTCLIGEDLVIVGGGASCYAFGTKFNEPMKIDLHLLESLHNLP
SDKENKSFLQFHDTHGNMNLQQDKHVDGMLDSSDVNLRIDISTNEDGHDVDGEHLVIKLE
KKYAKPVKDILKKFGWLDLTRKVRPSQDGCHIYLPVSRNFYAFYVEEQFNSVNNFDNLEA
FYQLGEFSLKELSVNEVSQSTALNFLLSCGGSLLDDDVVCMRKVHKSPEKMIKESVCSML
RIKRMPLQLLEQLPTRWEHLGDIVVLPKTSFKDPIWDSIGKELWPIVAKALGANRLARQG
RILPTGTRDSTLEILVGDNGWVTHQENGILYTFDATKCMFSSGNLSEKLRMASLDCRDEI
IVDLFAGIGYFVLPFLVKLIIKFLARARAKLVYACEWNPHALKALEHNINANSVADRCVI
LEGDNCVTAPKGVAHRVCLGLLPSSECSWVTAVRALRAEGGMLHVHGNVNDSEEFSWSEY
VVNSIRSIAQSEGLHWAVSVEHVERVKWYGPHIRHLVADVRCKQA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaaaaggaaggcgcaagccctggccgccatggcggcgccgcggccggac
aagtcccccaagggcacggtggacgcccccatcgtccccctgcttgacgctatcaatcgc
cacccctccttcttcaccaccagctcctgctccggccgcatttcgatcctcgcacaccga
accaacccgcccccttcttccgccgacgcgaccgcgggaaaccctaaactcgaggctgcg
gcgcccaagaagaagaagaaggccggcggaggtggttggcttttcgtctcgcacgactcc
gccgacccggaggccatcgtcgacctcctcttcggcgaccgccgggattccgagggaggg
gatctggtgttccggttcgagcccctcatcgtggccgtcgagtgccgggacctcgcctcg
gcgcagtcgctcgtctctactgctatttcttgcgggtttagagagtccggtatgacaagc
atacaaaaacgtataatggttgccatacgatgttctatacgtttggaggtaccattgggc
caaattggttttattatgatttcaccagagtatgttcggtaccttgttaggattgctaat
gataaaatggaggcaaacagaaagagaacggatggctttcttcatgttttgcaatctaag
gttctcccaggaccaggaaaggaggtgattgattctaataaaaagggtctagaacagatt
gccgataaaggattttcattagattttgaaactaagcctaatgtcgtattgtcggagata
tcaattgagaatggcacttcaaagtctcataccgaagataatatcttgggcttcatcaaa
gatagatgtgattccgaacctgctggatattctggagaagacaaatgcgctgttgcttcc
tgcaagaactcactaaaagtatctgatcctttacatgacaaggaaattggatacagccat
aaagagatagctgacaaagattctaacatagagttgtcaggaacaccaaagtgctttctt
tccgttgtcatgttaaagattgttggcgagccgattgagaagctcttcctctggggtcaa
tcagcttgtgcttcaaacaatggagggcaggaacatatccttgtctttggtggctttgga
ggcgtaggacgacatgaaagaagaaattgctccctggtgcttgatccccagtctggcctg
ttaagtgaaataaattctacaaaacccccatctccacgcttgggtcatacagcctccatg
gtggggagagagatttatgttattggaggaaggggtggtccttctcaaattcttaatgat
gtctgggttctagacaccactgaaaataggtggtcattattagaatgtactggcagtgct
tttaaccctaggcaccgccatgcagctgcagctgtaggctcaaatatatatgtctttgga
ggtcttaataatgaagtgatatattcctgcatgaatgtcttaaacactcaaactcttcag
tggagcaatgttagtatccaaggagattggccctgtgcacgtcattcacattctttggtg
gccagcggccctcagttgtttatgtttggaggttatgatggtgagaaggcactaggcgac
ctctacagttttgatgttagaacattacagtggagaaaagaggagacatctgggagagct
ccttctccaagattctcacattctatgtttatctataaaaattatcttgggatcatcggc
ggttgccctgttaggcaacagtatcaagaattggctttattgaacatgcatcatcttgtc
tggatgcatgtgactattgactctcttggtggagacctttgggttcgcagctcaacctgt
cttattggcgaagatcttgttattgttggtggtggagcatcatgttatgcatttggaaca
aagtttaatgagccaatgaaaattgatttacatttgttagagtctctacacaacctccct
tcagataaggaaaataagtcatttttacagtttcatgacacccatggaaacatgaatcta
caacaggacaagcatgtagatggcatgcttgatagttctgatgtaaatcttaggattgac
atttctaccaatgaagatgggcatgatgtggatggggaacaccttgttataaaacttgaa
aaaaagtatgctaaacctgtgaaggatatattaaaaaaatttggatggttggatcttact
aggaaggttcggccaagtcaggatggatgtcatatttatttaccagttagcagaaatttc
tatgccttctatgtggaagagcaatttaattcagtaaataactttgataatttggaagca
ttttatcaactaggagaattttctttgaaggagctttctgtaaatgaggtttctcaatca
actgcattgaattttttgttgtcatgtggtggttctttactagacgatgatgtagtctgc
atgagaaaggttcacaaatctcctgaaaagatgataaaagaatcagtttgctccatgctg
aggataaaaaggatgcctctgcagctgttggagcagttgcctacaaggtgggaacatctt
ggggatattgttgtgctaccaaagacatcttttaaggatcctatatgggactctataggg
aaggaactttggcctatagttgccaaagcgcttggtgctaatcgtcttgcacggcaaggt
cgaattttgcctactggaacaagagacagcactcttgaaattcttgtgggagacaatggg
tgggttactcatcaagagaatggaatcctttatacatttgatgcaacaaaatgtatgttt
tcctccggaaacctttctgagaagcttcgtatggctagtctagactgtagagatgagatt
attgtggatctatttgctggaattggatactttgtgcttccatttcttgtcaaattgata
ataaaattcttggccagggctagggcaaaactggtttatgcatgtgagtggaatcctcat
gctttaaaggctcttgaacataatatcaatgcaaattctgtggcagatcggtgtgtcata
cttgaaggagataattgtgtcacagcacccaaaggtgtcgcgcatcgtgtttgccttggt
ctcctaccatcaagtgagtgtagttgggttactgctgtgagggctttgagggcggaaggt
ggtatgctgcatgtgcatggaaatgtcaatgactcggaggaattctcatggtcagaatat
gttgttaattccataaggagcattgcacaatctgaaggtttacattgggctgtttcagta
gaacacgtagagcgagtgaagtggtatgggcctcatattcgtcatcttgttgctgatgta
agatgcaagcaagcgtag
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