Phoenix dactylifera (date palm): 103717910
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Entry
103717910 CDS
T03274
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103717910
Spliceosome [BR:
pda03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103717910
Other components
Complex C specific factors
103717910
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
103717910
NCBI-ProteinID:
XP_008804692
UniProt:
A0A8B7CRG6
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Position
16:7590624..7603543
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AA seq
868 aa
AA seq
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MDDEYQGMERFGMENDFEGGQWIDGEFYYQRRKERAPQTRDDAIYGTFAVGSSDSDSDGG
GGRRSRKRRRGDLISKPDLSKPVHFVSTGTVMPSQEINRNLEEDARNASADNPNPSHGLG
YGLGFGADSKERESGAGDVEEEDEENFLPTAFGRKIKEGAQRRQKEKEIEKERERERERE
GSKSMRKSLGRRDVTGTDEIGKFESHTKGIGLKLLKMMGYKEGSGLGKNKQGIVAPIEAK
LRPKNMGMGFNDYKEAKLPVLEEAVLQEKAAANSVAVGRSREKRWLKQKQGKKKDEILSA
EELLAKKQEQGIEVFQKVLDMRGPQVKVLTSLENLNAEEEVKESEVPMPELQYNVRLIVD
TTEVDIQRLDRDLRREREKVVSLQREKEKILKEETRQRQQLQVLEMIAGVLERVREENVS
GALTLDSLLKTFSNLKEKYEEDYKLCNLSCVACSFAYPLLIRVFQGWEPLQNPSHGWNLM
SSWRDLLQGDQPFDYSDNALATSPYAQLVNEVVFPAVRISGTNTWQARDPEPMLRFLEAW
DRLLPPVVLQSILENVVMPKLTAAVDSWDPRRETVPIHVWIHPWLPLLGQRLEALYHTIR
YKLGNVLHVWHASDASAYAILSPWKDVFDAASWEHLIVRYIVPKLKIALQEFQINPANQR
LDQFNWVMMWASAIPIHHMVHLLEVEFFSKWQQVLYHWLCSSPDFNEVMKWYIGWKGLFP
PELLANERIRMLLSAGLDMMNQAVEGMEVVQPGARENVSYLRVTERRQFEAQQQAGTSSN
IHANGVGSAPQETSFKEFIEAYAIEQGLIFVPKAGRSYNGLPVYGFGNVSICIDSVKQLL
FAQVQEGERWSAVSLTQLMEMHRIAARR
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagtaccaaggaatggagcgcttcggcatggagaacgacttcgagggcggc
cagtggatcgacggcgagttctactaccaacgccgcaaggagcgcgccccccagacccgc
gacgacgccatctacggcaccttcgccgtcggctcgtcggattccgactcggatggcgga
ggcggacggcgctcccggaagcgccgccgcggagacctcatctccaagcccgacctctct
aagcccgtccatttcgtctccaccggcaccgtcatgcccagtcaggagatcaaccggaat
ctcgaggaagacgcccgcaatgcctccgccgacaaccctaatcctagccacggacttggc
tatgggttagggttcggcgccgattccaaggagagggagagcggcgccggtgatgtcgag
gaggaggacgaggagaatttcctcccaacggcgttcgggaggaagatcaaggaaggggcg
cagcggcggcagaaggaaaaggagatagagaaggagagggagagggagagggagagagag
ggttctaaatcgatgagaaaatccctcggaaggagggatgtcactggcaccgacgaaatc
ggtaagtttgaaagccacacaaagggcatcggactgaagcttctcaagatgatgggttac
aaggaaggaagcggattggggaagaacaagcagggaattgttgctccgatcgaggcgaag
ctccggccaaagaacatgggaatggggtttaatgattacaaagaagcgaaattgcctgtt
ttggaagaagctgtgctgcaggagaaggcagcagccaactctgtggctgtcggtcgctcc
agggagaagaggtggttgaagcagaagcaagggaagaagaaagatgagattttgagtgcc
gaggagctgctggcaaagaagcaggagcaggggattgaggttttccagaaggtgctagat
atgaggggcccgcaggtcaaggtgctgacgagtttggaaaatttgaatgcggaggaagag
gtgaaggagagcgaggtgccgatgcctgagcttcagtataatgtgagattgatcgtagat
actactgaggtcgacatacagaggcttgaccgggatttgaggagggaaagggagaaagta
gtgagcttgcagagggaaaaggagaagattttgaaggaggagacccggcaaaggcagcag
cttcaagtgctggagatgatagctggtgttttggagagggtgagggaggagaacgtttcg
ggagccttgacgctggattcattgctgaaaacgttcagcaatctcaaggagaagtatgaa
gaggattacaagctgtgcaacctttcgtgcgttgcctgttcatttgcatacccattgctg
atccgagtgtttcagggctgggagccgctgcagaacccatcacatggatggaatctcatg
tcctcttggagggatttgctgcagggggatcagccatttgattactcggacaatgcatta
gctacttcaccctatgcccagctggtcaatgaggttgttttccctgcagtgaggatatcg
ggaaccaacacttggcaggccagggatccggagccaatgcttcggttcttggaggcttgg
gaccggctgctacctccagtagttcttcaatcgattttagagaatgtggtcatgccgaaa
ctgacagccgctgtggattcgtgggatcctcgccgagagactgtccccatccatgtttgg
atacacccatggcttccacttctgggacagagattggaagctctctatcacacaatacgc
tacaagctgggtaatgttcttcatgtgtggcatgcaagtgatgcatcagcttatgctatt
ctgtctccatggaaggatgtgtttgatgcagctagttgggagcaccttattgtacgctac
atagtaccgaagttgaagattgcattgcaggaatttcaaataaaccctgctaatcaaaga
cttgatcaatttaactgggtaatgatgtgggcatctgcaatcccaattcaccatatggtt
catttgttggaggtcgaatttttcagcaagtggcagcaggttctataccactggctatgc
tcgagtcctgattttaatgaagttatgaagtggtatataggctggaagggacttttccct
ccagaattacttgccaatgagcggattcgcatgctactaagtgcgggtttggacatgatg
aaccaagcggtggagggtatggaggttgtgcaacctggtgctcgagagaatgtgagctat
ctaagagtgacagagaggaggcaatttgaggcccaacagcaagctgggacatcttcaaac
attcatgcgaacggggtaggcagtgcaccacaagaaacaagctttaaagaatttattgag
gcttatgcaatagaacaggggttgatttttgtgccgaaagctggtagatcatacaatggt
cttccagtctatggatttggcaacgtgagcatttgcatagattctgtgaaacaactgctt
tttgcacaagtacaagaaggtgagaggtggagtgcggtctccctcactcaactaatggag
atgcaccgaattgctgctcgtcgctga
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