Phoenix dactylifera (date palm): 103718068
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Entry
103718068 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 3b-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103718068
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103718068
microRNA pathway
RISC loading complex
103718068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
DEAD
Helicase_C
ResIII
Ribonucleas_3_3
PAZ
SWI2_SNF2
SNF2-rel_dom
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
103718068
NCBI-ProteinID:
XP_038975886
UniProt:
A0A8B8ZNT7
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MDSAKEVMEDKEERPSRRPTKAFQPRSYQIKVFEVAMQRNTIAVLETGAGKTMIAVMLIK
EIGRKLIENGKKMFIFYLAPTVNLVNQQYEVIRDHTEFDVAEYYGAKKIGEWSAEFWKKE
VGSRDVVMMTPQILLDALKHAFLTLDMVNLIIFDECHRATGNHPYAKIMKEFYHKSGRKP
AIFGMSASPVVRKGVSSAKGCEEQISELESILDSKVYTVKDRAEVEAFAPSAKMINIYYD
ATNFNFQDMKIKLEALREKVDASLVSLQESPSNQFKDTNDILMASRKSLSRYHGKILYCL
DELGLICAAEAAKVCIENVHVLYAVGENEFSKASFDLYIYFLEEVLHTIKKILPHDYEQL
TKTESNYIEATKMGLVSPKLDKLVHICQSFGSSKKLLCLIFVQRIIAAKVIERFMKMISK
LSHFAISYLTGGNSSKDALSPKMQKATLDMFRAGKVNILFTTDVAEEGIHVPNCSCVVRF
DLPKTVRSYVQSRGRARQSDSRYVLMIERGNTEQRDHLFDIIRGEFLMTSSALYRYHKTS
ISKICCEHKDVYCVGSTGATVTADSSVNLIYKYCDKLPKDRYFIPQPSFQLLAKDGLFEC
TLTLPPNAAFQRMAGPLSTNSNLAKQLVSLEACKKLHELGALSDHLLPFPEEPLETDIGG
INKDYASGAGTTKRKELHGMISVRALSGTWAHRPDNVTLNAYKINFVCDQEGENYSGFFL
LIEAILDADVARANMELFLIPNKVVKTSISPSGNIQLNADQVEKSKLFQEXFFNGLFGKL
FSGSRSSGVQREFLFRAGHKISWSSLNMYLLLPLESSLLTNHGTLNIHWKAIDACASVVN
YLRNIHSINGECCSECSVDSCSISYRASSKKSDIIHLANKSLNTEYVKDSVVLSIHTGRI
YSVLDVLDDTTTESPFDESFDAKPSQFASFIDYYYQKYNIVLKYPGQPLLLLKQSHNPHN
LLFSKSDGSTGQRLMVEKEQVHARIPAELLVHIDISTDILKSFYLLPSVMHRLESLMLAS
QLREEIGSSHSHSRISSSLILEAITTLRCCENFSLERLELXGDSVLKYIVSCHLFLRYPK
KHEGQLSDHRSWATCNSTLHKLGTGRSLQGYIQDRAFDPRRWVAPGQISLRPIPCICGID
TSDVPVEERYMTEDTSVVVGKACDKGHRWMCSKTIADCVEALIGAYYVGGXLSAVFSLMR
WLGIDVKFETTLVKEAKMIASRWCYLSLVNEIEMLESKLNYRFSXKGLLLEAITHPSRQE
LGLDYCYQRLEFLGDSVLDLLITWHLFINYRDIDPGELTDLRSASVNNEYFHKLLXDTNF
QQYLQHGSGILLGQITDYVKYISENQGSEDMLHQLVFTKVPRFLEIL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggattccgccaaagaagtcatggaggacaaggaggaacgaccatctcgaaggccaacc
aaggctttccagcctaggagttatcagattaaggtattcgaggttgcaatgcaaaggaac
actattgcggtgctggaaacaggggccggaaagacgatgatcgcggtgatgcttataaag
gagattgggagaaagctgattgaaaatggtaaaaagatgttcatattttatctggcacca
accgttaatcttgtcaatcagcaatatgaagtgatcagagatcatacagagttcgacgtg
gctgaatactatggggcaaagaagattggtgagtggagcgctgaattctggaagaaggaa
gttggcagcagagatgttgtgatgatgactccccagattttattggatgctttaaagcat
gctttcctgactctggacatggtaaacttgataatctttgatgagtgccatcgtgcaact
ggaaatcatccatatgcaaaaataatgaaggaattttaccacaagtctggacgcaagcca
gccatttttggaatgagtgcatctcctgtagttaggaaaggggtttcatcagccaaaggt
tgtgaagagcaaatatctgagcttgaaagcatcttagattctaaggtttatactgtaaag
gatagagctgaagttgaagcatttgctccttcagctaagatgattaatatatactatgat
gccaccaactttaactttcaagatatgaaaattaagttagaagctttaagggagaaggtt
gatgcttcactggttagtttgcaagaatcaccgtccaatcaatttaaagacactaatgat
atactaatggcatcaagaaagagtttgtcaagatatcatgggaagattttgtattgtcta
gatgagcttgggcttatttgtgcagctgaggcagcaaaagtgtgtatagaaaatgtccat
gtcctatatgctgttggagagaatgaattttctaaagcaagttttgacttatatatttat
tttctagaggaagtattgcacacaataaagaagatattaccacatgactatgaacaactt
acaaaaacagaaagcaactatattgaggcaactaaaatgggacttgtatctcctaagttg
gacaaactggttcatatttgtcaatcatttgggtcatctaaaaaattactttgtctaatt
tttgtacaaagaattatagcagctaaagtgattgaacgattcatgaaaatgatcagtaag
ttatctcattttgcaatctcttatttaacgggggggaattcatcgaaagatgctctatcc
ccaaaaatgcaaaaggctactctagatatgtttcgagctgggaaggtaaacatcttgttc
actacagatgtagctgaagagggaattcatgtacctaattgttcttgtgtggtacgtttt
gacctgcccaaaacagttcgtagttatgtccagtctcgtggccgagcacggcagagtgat
tcccgttatgtcctcatgatcgaaaggggaaatactgaacaaagagatcacttgtttgat
attattcgaggtgaatttttgatgacaagttctgctttatatagatatcacaagacttct
atctctaaaatttgttgtgaacataaggatgtatattgtgttgggtcaacgggagcaaca
gttactgcagattctagtgttaacctcatttataaatactgtgacaagcttccaaaagac
aggtatttcatcccacagccatccttccaattacttgctaaagatggcttatttgagtgt
acgttgactttacctccaaatgcagcatttcaaaggatggcaggtcctctgagtaccaac
tctaacttagcaaagcagctggtgtccttagaggcctgtaaaaaactgcatgagttgggt
gcactaagcgatcatcttcttccttttcctgaagagcctctggagactgatattggtgga
ataaacaaagattatgcttctggggcaggaacaactaaaaggaaagaacttcatggaatg
atcagtgtccgtgctttatctggaacttgggctcacagacctgataatgtgacattgaat
gcatataaaataaattttgtttgtgaccaagaaggtgaaaactattctggattttttctc
ttaattgaggcaatacttgatgctgatgtagcaagggcaaacatggagctcttcttgatt
cctaacaaggtggtcaagacatccatttctccaagtggcaacatccaattaaatgcagat
caggtggaaaaatcaaaactgttccaagaantttttttcaatggcttatttggtaagttg
tttagtggatctagatcatctggagtgcagcgggaattcctgttcagggcaggacataaa
atatcatggagctctctgaatatgtacttgcttttaccccttgagtcctcattgcttaca
aatcatggtactctaaacattcactggaaggcgatcgatgcatgtgcatccgtggtgaac
tatctgagaaatatccactcaataaatggtgagtgttgttctgaatgttcagtagacagc
tgttcaatatcttatagagcatcaagtaagaagtcggacatcattcacttggctaacaaa
tctcttaatactgagtacgttaaagattcagtggttttatccattcatactgggaggatc
tattctgttcttgatgtgttagatgatactactacagagagcccatttgatgagtctttt
gatgccaaaccatcacagtttgcttcattcatagactattactaccaaaagtacaatatt
gtacttaaatatccaggacagccactgttattactaaagcaaagccataacccgcacaat
cttcttttttcaaaatcagatggttccactggccaaagattgatggttgagaaagaacaa
gttcatgctcgtatccctgctgaacttttggttcacattgatatatcaaccgatatattg
aagtcattttatttactaccttcagtaatgcatcgtttggaatcattgatgctggccagc
caacttcgtgaagaaattggttctagtcatagccattctcgcatatcgagttctctgatt
ttggaagcaattacaactttaagatgttgtgagaatttttctttggagcgtttggaactt
nttggggactcagtgcttaaatatatagtgagctgccatctatttttgagatatcctaag
aagcatgaagggcagctatctgatcatagatcttgggcaacttgtaactcgacacttcat
aaactgggaactggtcgctccctgcagggttatatacaggacagagcatttgatccacgg
cgctgggttgctcctggacaaatttcattacgtcccatcccttgcatttgtgggattgac
acttctgatgttcctgtcgaagaaagatacatgactgaagatacttctgttgtggtagga
aaggcctgtgacaaaggtcacaggtggatgtgctctaaaactattgcagattgtgttgaa
gctctcataggagcatattatgtaggtggtngattaagtgctgtattttcattgatgaga
tggttaggcattgacgtaaaatttgaaacaacattagtgaaagaagcgaagatgattgca
tctcgttggtgttacctttcactagtgaatgaaattgaaatgttggaatctaaacttaat
tataggttttcanataaaggtttactattggaggccattacacatccatctcgacaggag
ttaggacttgattactgctaccagcgacttgaatttctgggcgactctgtattggacttg
cttatcacatggcatctcttcataaactatagagatattgaccctggagaactgactgac
ttgcgttcagcctcagttaataatgaatattttcacaagctgctgtaagacacaaacttt
caacaatatcttcaacatggctctggaatacttttagggcaaataacagactatgtaaag
tatatttcagaaaatcaaggcagtgaagatatgctccatcagctggtgttcacaaaagtc
ccaaggttcttggagatattgtag
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