Phoenix dactylifera (date palm): 103718112
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Entry
103718112 CDS
T03274
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04142
Lysosome
pda04144
Endocytosis
pda05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103718112
04142 Lysosome
103718112
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103718112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103718112
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103718112
Membrane trafficking [BR:
pda04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103718112
Exosome [BR:
pda04147
]
Exosomal proteins
Proteins found in most exosomes
103718112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
103718112
NCBI-ProteinID:
XP_008805008
UniProt:
A0A8B7CRP2
LinkDB
All DBs
Position
12:complement(5708179..5726188)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAANAPIAMREALTLPSLGVNPQFITFTHVTMESEKYICVRETSPQNSVVIIDMNMPTQ
PLRRPITADSALMNPNSRILALKAQIAGTTQDHLQIFNIEMKTKMKSHQMPEQVVFWKWI
TPKMLGLVTQTSVYHWSIDGDSEPVKMFDRAANLTNNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGSMQLFSVDQQRSQALEAHAASFASFKVAGNENPSILICFASKTTNAGQITS
KLHVIELGAQPGKPGFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTTEASSNGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAADSPQGILRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKSLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTVTDLFLQRNMIREATAFLLDVLKQNLPEHAFLQTKVLE
INLVAYPNVADAILANGMFSHYDRPRIAQLCEKAGLYMRALQHYTELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWALECMKDLLLANLRGNLQIIVQAAKEYSEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPQKTKNFLMES
KLPDARPLINVCDRFGFIPDLTHYLYTNNMLRYIEGYVQKVNPSNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLQPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADASRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAYRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEAGNVYHDLVKYLLMVRQKAKEPKVDGELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLFDNALYEAAKIIFAFISNWAKLASTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIRLFSTRLNIPKLIRVCDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDILNVL
ALRVDHTRVVDIMRKAGHLHLVKPYMVAVQSNNVAAVNEALNGIYIEEEDYDRLRESVDM
HDNFDQIGLAQKIEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETCSQSGD
RELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAFPYLLQYIREY
SGKVDELIKDKIEAQSEVKSKEKDEKDLVAQQNMYAQLLPLALPAPTMPGMGGPSMGGPF
SAPQPPVGGMGMPPMPPFGMPPVGSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccaacgctcctatagccatgcgggaagccttgacgcttccgagtcttgga
gtcaatccgcaattcatcacttttacgcatgtaacgatggaatcggagaagtatatttgt
gtcagggagacgtctccgcagaacagtgtagttatcattgacatgaacatgccgacgcag
ccgttgaggagacctattaccgcggactcagctctgatgaatcctaacagcaggattctt
gctcttaaagctcaaatagcaggaactactcaggatcaccttcagatattcaatattgag
atgaagactaaaatgaaatctcatcagatgcctgagcaggtcgtcttctggaaatggatc
accccaaagatgttggggctggttactcaaacttcagtatatcattggtcaatagatggt
gattcggagcctgttaagatgtttgacagagcagctaatttgacaaacaatcagatcatt
aattaccggtgtgatccctcagaaaagtggctagttctgatcggtattgcacctggtgcc
cccgagagaccacaactggtcaagggaagtatgcagcttttttccgtggatcagcaacgc
agtcaggcacttgaagcacatgctgcatcctttgcatcatttaaggttgctggcaatgaa
aatccttccattcttatttgttttgcttcaaagaccactaatgctggacagattacgtca
aagctgcatgttattgaacttggtgcccagccaggtaagccaggttttacaaagaaacaa
gcagatctgttcttcccacctgattttgccgatgacttccctgtcgcaatgcagatttca
cacaagtacagtttgatatatgtgatcacgaagcttggtctgttatttgtgtatgatttg
gagacggcaacagcagtctatagaaatcgaattagtccagatcctatatttctgacaaca
gaggcttcgtctaatggtggtttttatgctattaatagacgggggcaggttttgcttgcc
actgttaacgaggcaactattgtgcccttcgtcagtggtcaattgaacaatctggagcta
gctgttaatcttgccaaacgaggaaaccttccaggggcagagaatttggttgtgcagagg
ttccaggagctattctctcaaacaaaatacaaggaagctgccgaactggctgcagactct
ccgcaaggcattctgcgaacacctgagactgttgcaaaatttcagagtgttcctgtgcaa
gctgggcaaacaccacccttgttgcagtattttggaacattgctaactaaaggaaaactc
aatgcattcgagtctttggaattgtctcgcctagttgtgaatcagaacaaaaagtctcta
ttggaaaattggttggctgaggacaagcttgagtgcagtgaagaacttggggatcttgtg
aagactgtggacaatgatctcgcactgaaaatatatataaaagcgagggctacaccaaag
gttgttgccgcttttgcagaacgaagggagtttgacaagattctcatatactccaaacag
gttggatacacaccagattatcttttccttctgcagacaattctacggtcagatccccag
ggagcagttaattttgctcttatgatgtcacaaatggagggtggctgtccagtggattat
aatacagtcacagatctcttccttcagaggaacatgatccgagaggcaacagcttttctg
ttggatgttttaaagcagaatctacctgagcatgctttccttcaaacaaaggtcttagag
atcaacctggtggcgtatccaaatgttgcagatgctatattagctaatggaatgttcagt
cattatgatcgcccccgaatagctcaactgtgtgagaaggctgggttatatatgagagcc
cttcagcattatacagagttgcctgatattaaacgtgttattgtgaatactcatgccatt
gagccccaggcactagtggaattctttgggacactttctaaagagtgggcattagagtgc
atgaaggatcttttgctggccaatctgagaggaaatcttcagataattgtgcaggcggca
aaagaatattccgagcagttaggtgtggaagcatgcataaaactgtttgagcaatttaag
tcctatgaaggtctttacttctttttgggttcatatctgagttccagtgaagatccagat
atacacttcaaatatatcgaggcagcagccaaaactggccaaatcaaggaagttgagcgt
gtaacaagagaatctaacttctacgacccacagaaaacaaagaatttcctgatggaatcc
aaactaccagatgcacgccccctgataaatgtctgtgatcgttttggatttattcctgat
ttgactcactacttgtatacaaacaacatgcttcggtatattgaaggctatgtgcagaaa
gtgaacccaagcaatgctcctttggtggttggacaacttctagacgatgagtgtcctgaa
gatttcataaaaggtctcattctttctgtccgttccctgcttccagttgagcctcttgtt
gctgaatgtgaaaagaggaatcgtctacggttactcacgcaatttttggaacatctggtg
agcgagggaagccaggatgtgcatgttcacaatgctctgggaaagatcattatagacagc
aacaataatcctgagcattttctcacgactaatccatattatgattcacgtgtcgtgggt
aaatactgtgaaaaacgggatcccacccttgcagttgttgcatatagacgtggacaatgt
gatgatgagctgataaatgtcacaaataaaaactctcttttcaaactgcaggccagatat
gtggtggaaaggatggatggtgatctatgggagaaggttcttcaacctgataatgagtat
agaagacagcttattgaccaagttgtttctactgcattgcctgaaagcaagagtccggag
caagtttctgcagctgttaaagctttcatgactgctgatcttccacatgaactgattgaa
ctgcttgaaaagattgtgcttcaaaattctgcattcagtgggaacttcaatttgcaaaac
ctgcttatcttaacggccattaaagcggatgcatccagggtcatggattacattaatagg
ttggacaactttgatggccctgcggttggagaggtagctgttgaagcacaattatatgag
gaagcctttgccatctttaagaaattcaacctaaatgtacaagcagttaatgttctcctg
gataacatccaaagcatagagcgggctgtagaatttgcatatcgagttgaagaagatgct
gtttggagccaggttgctaaggctcagttaagggaagggttagtaagtgatgccattgaa
tcattcatccgtgcggatgatgcaacccaattccttgatgttattagggctgctgaggca
ggtaacgtgtatcatgacttagtgaagtacttgctgatggtgagacaaaaggccaaagag
ccaaaggtggatggcgaacttatttatgcatatgcgaagatagatagactaggtgaaata
gaagaattcattcttatgccaaatgttgctaatctccaaaatgttggtgatcgtttattt
gataatgccctttatgaagctgctaagataatatttgccttcatttccaactgggctaag
ctggctagtacattagtcaagctgaagcagttccaaggtgcagttgatgctgctcgcaaa
gcaaacagctcaaagacatggaaggaggtttgttttgcctgtgttgatgctgaggaattc
cgcctggcccaaatttgtggtctgaatatcattatacaggtggatgacttggaagaagtc
agtgaatattaccagaacaggggatgcttcaatgagctaatttcacttatggagagtggc
cttggattggaacgtgcacacatgggtatttttacagagttgggagtgctgtatgcaaga
taccgaccagaaaaactgatggagcatattagacttttctctacccgtctcaacattccc
aagcttatccgtgtatgtgatgagcagcagcactggaaagagctcacctatctgtatata
cagtatgatgagtttgacaatgctgccaccactataatgaaccattctcccgatgcatgg
gatcacatgcagttcaaggatgttgtagtcaaggttgcaaatgttgagctctattacaag
gcagtgcatttctatctgcaagaacatcccgacctgattaacgatatccttaatgtactt
gcccttcgtgtggatcacacacgtgtagttgacataatgcggaaggctggtcacttgcat
cttgtgaaaccgtacatggttgcagtacaaagtaacaatgtagctgctgttaatgaagca
ttgaatggaatttatattgaggaggaggactatgacaggttacgggaatcagttgatatg
catgacaactttgatcagataggtctagcacagaagattgagaagcatgagcttctggag
atgaggaggattgctgcatatatctataagaaagcagggaggtggaagcagtccattgct
ctgtccaagaaggacaacctgtacaaagatgccatggagacatgctcacagtctggtgac
cgtgagctctcggaagagttgcttgtttatttcattgagcagggaaagaaggaatgcttt
gcttcatgtctcttcatatgttatgacttgattcggcctgatgttgcccttgagcttgcc
tggatgaacaacatgattgactttgctttcccgtacctcttgcagtatattcgtgagtac
agtggcaaagtagatgaactcataaaagacaaaattgaagcacaaagtgaagtcaaatct
aaagagaaggatgagaaggatttggttgcacagcagaatatgtacgcacagttgctgcca
cttgcattgccagctccaacgatgccaggcatgggaggacctagcatgggcggacctttt
tcagccccacaaccgccagtgggtgggatgggcatgcctccaatgcctccatttggtatg
cccccagtggggagctactga
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integrated database retrieval system