Phoenix dactylifera (date palm): 103718556
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Entry
103718556 CDS
T03274
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103718556
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103718556
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2917
Motif
Other DBs
NCBI-GeneID:
103718556
NCBI-ProteinID:
XP_008805657
UniProt:
A0A8B7CSY1
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All DBs
Position
17:complement(14003672..14005006)
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AA seq
347 aa
AA seq
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MNVIDRCWRRHPNWSANRQRLAKCSAGFAGKMVQNSGRGLIFYTVTDPSDDPVNPRPGTL
RFGATVLKGKVWVTFQRDMTIKLLQPLIVKSFTTIDGRGVDVQIAQGAGFLINKASNVII
HGLQFHHIHAQPAGSVRDPEGNLVDLGVDGDAIRLVAAQKVWIDHNSLYRCQDGLLDATR
GSTEITISNNWFRDHDKVMLLGHDDSFAEDRNMKVTVVYNRFGPNCNQRMPRVRHGYAHI
ANNVYDGWGEYAIGGSMNPSVLSEGNLFIASGKRKATMRLPGEGVNSWNWKSVNDAFVNG
AFFKAVGVVKGLPPYQKQQSFPVANVRDVGMLTKYAGAIRCSIRSRC
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatagatcgatgctggcgtcgtcatccaaactggtcagccaacaggcaacgg
cttgccaagtgctcggcggggttcgccggaaagatggtgcagaacagtggccgtgggttg
atattctacaccgtcaccgaccctagcgacgaccctgtaaaccctcgtcctggcacatta
cggtttggggccaccgtactcaaaggtaaagtatgggtcaccttccaaagggacatgacc
atcaagctcctgcagccgctcatcgtgaagagcttcaccaccatcgatggtcgtggcgtc
gacgtccaaatagcacaaggagctggattcttaatcaacaaggcaagcaatgtcatcatc
cacgggcttcaattccaccatatacatgcccagccagctggttcagtaagggacccggag
ggtaacctggtggacttgggagtggacggtgatgcaatccgactggtagcagcccagaag
gtctggatcgatcacaactcactctaccggtgccaggatgggctcttggacgcgacgagg
ggctcgacggagatcaccatctccaacaattggttccgggaccatgacaaggtgatgctt
ctgggccacgacgacagcttcgccgaggacaggaacatgaaggtgacagttgtgtacaat
cggtttggtccaaactgcaaccagcgcatgccaagggtaaggcatggatatgctcatata
gcaaacaatgtgtacgacggatggggagagtacgccattggtggaagcatgaatcctagc
gtccttagcgaagggaatctattcatagcttcaggcaagaggaaggcaacaatgagactt
cctggcgaaggggtgaattcatggaactggaagtcagtgaacgatgcctttgtcaatgga
gctttcttcaaggcagttggggttgttaaaggtttgccaccgtatcaaaagcagcagagc
tttccggttgccaatgtcagggacgttgggatgttgacgaagtatgcaggcgccatccgt
tgctccataagatctaggtgctga
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