Phoenix dactylifera (date palm): 103718623
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Entry
103718623 CDS
T03274
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103718623
03400 DNA repair and recombination proteins [BR:
pda03400
]
103718623
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103718623
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103718623
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103718623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
103718623
NCBI-ProteinID:
XP_008805756
UniProt:
A0A8B7CTJ9
LinkDB
All DBs
Position
3:16440508..16460775
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AA seq
915 aa
AA seq
DB search
MGENDVFADHIIAELIDMGFEFAKAIEAIEAVGPCLDDAVEFILNGSSDSKMAKNGQVSS
NFTSFTSQKRSLGKVVMSSHPSNRMEQSSISHHISSFGRTKRSISHSASGTSFSGMKKLR
SSNLNHPKVPDVCMNSNMELASQSFQQDVQTHVPPIELTELPQENGSFRSEQISHLCNFE
SEEAELDWEDKVSSVLQKHFGFSSLKGFQKEALEAWLAHRDCLVLAATGSGKSLCFQIPA
LLTSKIVIVISPLISLMHDQCLNLAKHRISACFLGSGQPDRSVQCKAMNGVYRIVYVCPE
TILRLMEPLKRLAENPGIALFAIDEVHCVSKWGHDFRPDYGKLSVLRENFNTCNLKFLKF
DIPLMALTATATIPVRKDIFKLLHMSKETRIVLTSFFRPNLRFSVKHSRTTASSYEKDFH
ELIKTYTMARMSGKKGLKHLLNDLEDDSNSSCKASDDGMSDENGKLVNGIKSLEDDHFYE
DSDDASSANEDSIVPPLRQNQLTAEYLEDDLDLPDSVNEFDVSCGEFLGTYPAESSEFCG
ASEVSDLQGFVEQGPTIIYMPTRKETQELAKYLCRSGVRAAAYHAKMPKSHLRRVHEDFH
QNLLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLDAYYQEVGRAGRDGKPSDCTLYANLS
RIPSLLPSQRSEEQTKQAYKMLSNCFRYGMNTATCRAKVLVKYFGEEFSYDKCNLCDICV
TGAPEMQNLKEEADIFLRVLRAECGSSSIGTVSHDGAIYSGSGSRRFIEKPNFKMVISKI
REQFHKFAASDRLWWQGLARILENMGYVREGDISPHVSIRYPELTDLGLRFLHLESEKTL
YAYPEADMLLSVQKHKPHSSFSEWGRGWADPEIRRQRLQAKKFRTRKRKRQSRKHNQDLN
TVRGRLAAKLSKYKH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaatgatgtttttgctgatcacatcattgctgaattaattgatatgggcttt
gagtttgcaaaagctatagaagctatagaagctgtaggcccatgcctcgatgatgcagta
gaattcattttaaatggttcttctgatagcaaaatggctaaaaatggacaggtttcaagt
aattttactagcttcactagtcaaaaacgttctttgggcaaagttgtcatgtcatcacat
ccttcaaataggatggaacagtcaagcatatcacaccatatttcttcatttggtagaaca
aaaagaagcatttcccacagtgcttctggcacttccttttctggaatgaaaaaattaagg
tctagcaatttaaatcaccccaaagtccctgatgtttgtatgaattctaatatggagctt
gcatcccaatcttttcaacaagatgtacaaactcatgtgcctcccatagagttaacggag
ttgccacaggaaaatggaagctttcggagtgaacagatttcacatttatgcaactttgag
agtgaagaagctgaattggactgggaagacaaagttagtagtgttttgcaaaagcatttt
ggattttcatccttgaagggtttccagaaggaagctttggaggcttggttagctcatagg
gattgtctagttcttgctgccacaggatctggcaagtctctctgttttcaaattccagca
ttattgactagcaagattgtgattgtgatttcacccttgattagtttgatgcatgatcag
tgtttaaatctagcaaaacataggatatcagcatgcttccttggatctggacaacctgat
agaagtgttcagtgcaaagccatgaatggtgtatataggatagtatatgtttgccctgag
acaatactaagactcatggagccacttaaaaggcttgcagagaatcctgggattgcactt
tttgcaattgatgaagttcattgtgtttctaagtggggccacgattttcgacctgactac
gggaaattgtcagtgttgagagaaaacttcaatacctgcaatttgaagttcttaaagttt
gatattccactgatggcgttgactgctactgcaacaatacctgttcgcaaagacattttc
aagttattgcacatgtccaaggaaacaaggattgtactgacttcttttttccgaccaaac
cttcgattttctgtaaaacatagtagaacgactgcatcatcatatgagaaagattttcat
gaactaataaaaacatacactatggcaaggatgagtgggaagaaaggattgaaacatctt
ttaaatgatttagaagatgattctaacagctcctgcaaggcttcagatgatggcatgtct
gatgaaaatggaaagttggtaaatggtatcaaaagtcttgaggatgatcacttttatgaa
gatagtgatgatgcaagttcagcaaatgaagattctattgttcctcccttaaggcaaaat
caactgacagctgaatatcttgaagatgacctagaccttcctgacagtgtgaatgaattt
gatgtttcttgtggagaattccttggaacttatccagctgagagctctgagttttgtggg
gcatctgaggtatctgatcttcaaggctttgtagaacaaggtcctacaattatatacatg
cctaccagaaaagaaacacaagaattagcaaaatatctctgtagatctggtgttagggct
gcagcatatcatgcaaagatgcctaaaagccatctgaggcgtgtccatgaagattttcat
caaaatttgttggaggttgttgtggctacaattgcttttggaatgggaattgataaatct
aatgttcgaagaatcatccactatggttggccacagagtttggatgcttattatcaagaa
gttggtcgagctggaagagatggaaaaccatcagattgcactttatatgctaatttatca
agaataccatcactacttcctagtcaaagaagtgaagaacagacaaaacaggcatacaaa
atgctatccaactgtttccgatatggtatgaatactgcaacttgccgagctaaagtgcta
gtaaaatacttcggggaagagtttagttatgacaaatgcaacttgtgtgacatctgtgtt
actggagctcctgaaatgcaaaatctgaaggaggaagcagatatttttttgagggttctc
agagctgaatgcgggtcgtcaagtattggcactgtatcacacgatggtgcaatatacagt
ggatctggtagcaggaggttcattgagaagcccaacttcaagatggtcatcagtaaaata
agggaacagttccataagtttgctgcaagtgatcgtttatggtggcaaggtcttgcacgc
atattggaaaatatgggatatgttagagaaggagatatctcgccccacgtatctatacgg
tacccagagctgacggacttgggattgcgatttctgcatttagagtcagagaaaactttg
tatgcataccctgaagctgacatgttactatcagtgcaaaagcataagccacactcttct
ttctcagagtggggacgagggtgggctgaccctgagatccggcgccagcgactacaagcg
aaaaaatttaggacaaggaaaaggaaaagacagtctaggaagcataatcaggatctgaac
actgtcagaggaaggttagcagcaaaactatcaaaatataaacattaa
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