Phoenix dactylifera (date palm): 103718979
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Entry
103718979 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103718979
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pda01001
]
103718979
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103718979
03036 Chromosome and associated proteins [BR:
pda03036
]
103718979
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
103718979
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103718979
Protein kinases [BR:
pda01001
]
Serine/threonine kinases: Other
TAF1 family
103718979
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103718979
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
103718979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
Rad60-SLD
START_2
Motif
Other DBs
NCBI-GeneID:
103718979
NCBI-ProteinID:
XP_008806233
UniProt:
A0A8B7CTS5
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MSRDDNEDDDYEEFGGGNRFLGFMFGNVDNSGDLDIDYLDEDAKEHLAALADKLGPSLTD
IDLIKSSPGAPDASEQDYDEKAEDAVDYEDIDEQYDGPEVQAGTEEDHLLPKKDFFSSNV
SLASLSNKASVFDEENYDEDEETVKDNEVDGNDVDVQICPSADEQLELISSVEISPDDNL
PSVASSEPEQMIPELEDFQEHAIDEQKQMESKSGTSLPILCIDNGVVILRFSEIFGVHEP
KKQAERKDQHRHSVNKEWLKPLDVADIVEEDEEAFLRSTSQDLSTVKLFNSAIDDVEGNV
KQEISGVAEQLKDSCLSAQPMKENITIDMFSGQRSPLCPNFYPLDQQDWEDAINWGNSPT
ASHGCSESCMLSELDVEVPNDAEFEEGSRCRNTEPDENDCNLPGDHILVEPFGSRNFLDS
PCNQSAEKSYHPQLLRLECLSKKDGLYSEEVEAENGTAEVCKGDVLRRLIKLSLQNKELS
EGSWLDQIIWDPDEAIPKPKLILDLQDDQMLFEVLDNKDGEHLRSHAGAMVITHSSKSSK
EDSIDLHSQGSSASRFNISNDKYYSNRKSSQQAKSHAKKHAFLGIKVMHSVPALKLQTMK
PKLSNKELANFHRPKALWYPHHNKVAAMIQGAPCTHGPMKIILMSMGGKGKGTKLTVNAE
ETLLSFKQRASKKLDFKLSEKVKVYYSGRELEEDMSLAEQQVRPNSVLQLVRTRIHVWPR
AQKLPGENKPLRPPGAFKKKSELSVKDGHVFLMEYCEERPLLLGNVGMGARLCTYYQKTA
PSDLTASSLRNGNEGLGTVLTLDPADRSPFLGDIGPGCSQSCLETNMYRAPVFPHKLSST
DYLLVRSAKGMLSLRRIDKLYVVGQQEPHMEVLSPGSKNVQTYLANRMIVHVYREFRAND
KPDFLPYIRADELAALFPSLTDAFVRKRLKHCADLKKGKNGQLMWGRRRDFRIPSEEELR
RMLTPENVCSYESMQAGLYRLKRLGISRLTQNVGLSSAMNQLPDEAISLAAASHIERELQ
ITPWNLTSNFVACTNQGRENIERLEITGVGDPSGRGLGFSYVRVTPKAPISNAVVKKKAA
AARGGPTVTGTDADLRRLSMDAAREVLLKFKVPEERIDKLTRWHRIAMVRKLSSEQAASG
VKVDAMTLSKFARGQRMSFLQLQQQTREKCHEIWDRQVQSLSAADVDESDSDPEANSDLD
SFAGDLENLLVAEECEDDDGTTDLRGDKADGVRGLKMRRCPSQAQTEEEIEDDEAEAVII
RRLLEDDGADIKKKRTKLNGVEVGHGSHLDPANAECTKKINTVVGQIVSTPNPDGSFTSK
ELMTQKPKEVEIFFAERSLSGKVKPKKGNGVNDDVSGLVNKKSASVKDGLKVFKEKKQHD
KPVRENFVCGACGQLGHMRTNKNCPKYGEDAETSELESVSGKSNLPDAATQLQVKTPNKK
LVPKMLAKVADAEVPESVERAGLKLPTKILPVKFKCGPAEKPCEKNLSGIHTSDKQIVDA
EGANKPSGKINKIIISNKSNSGDVQNEIQKSSVLIRLPVDTEKEQSRKKIIIKQPKVNTN
VEQVNSATDTGIDHDFRKIKKITELSSFEKKKNQESQWFTEETSKRNLIYDRRLWDEEEK
RKNKERIVEEKTSRMLQEERRMQEEHRLFEARRYPEAFRREERTKKKKKKKKHDFRDEYL
LDHRPYRNDRRIPERDRAAKRRPMADADQTEYAPLTKRRRGGEVELSNILESILDSLKET
IEISYLFLKPVTKKEAPDYLDIIKRPMDLSTIREKVRNMEYKSREDFRHDVWQIAYNAHK
YNDGRNPGIPPLADQLLELCDYHLEQKHHMLSDAEAGIEFRDM
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagatgataatgaagatgatgattatgaggagtttggtggaggaaatcgtttc
ctgggttttatgtttggaaatgttgataattctggtgaccttgacattgactatcttgat
gaggatgcgaaggagcatcttgctgcattggctgacaagctaggtccatctcttacggat
attgacttgatcaaatcctctccaggggcaccagatgcttccgaacaagattatgatgag
aaggctgaagatgctgttgactatgaagatattgatgaacaatatgatgggcctgaggtt
caggctggcacagaagaagaccatttgctgccaaagaaagatttcttttcttccaatgtg
tcactggcttctttaagcaataaagcttctgtttttgatgaggaaaattatgatgaggat
gaagaaactgtgaaggacaatgaggtggatggaaatgatgttgatgtccaaatttgtcca
tctgcagatgaacaattggaattaatatcttcagtagagatttctcctgatgacaatttg
ccttctgttgcatcatcagagccagaacaaatgatccctgaattggaggattttcaggaa
catgctattgatgaacaaaagcaaatggaatctaaaagtggaacttcccttcctattttg
tgcattgacaatggtgtggtgattttgaggttctcagaaatttttggtgtacatgagcct
aaaaaacaagcagagcggaaggatcaacatagacattcagtaaataaagagtggctcaaa
cccttggatgtcgctgatattgttgaagaagatgaggaggcctttctgaggagcacttct
caagatttatctactgttaagcttttcaactctgctatagatgatgttgaaggcaatgtg
aaacaagaaatatctggtgtcgctgagcagttgaaagattcttgtctttccgctcagcca
atgaaggaaaatataaccattgatatgttttcaggtcaaaggtctccactgtgtcctaat
ttttatccccttgatcagcaagactgggaggatgcaattaactggggaaattcacccact
gcaagtcatggttgttcagagagttgtatgctgtctgaacttgatgtcgaagtgcctaat
gatgctgaatttgaagaagggtcacgctgtagaaacactgagcctgatgagaatgattgt
aatttaccgggtgatcatattttggtagagccatttggttccagaaattttttagattca
ccatgcaatcagtcagcagaaaagagttatcatcctcaattacttaggttggagtgtctt
tccaaaaaggatggtttgtattctgaagaagtcgaggctgagaatgggacagcagaagtt
tgcaaaggtgatgttttacggcgtcttatcaaactttctttgcagaataaggaattgtca
gaagggtcttggttggatcagattatttgggatccagatgaagctattccaaagccaaag
ctgatccttgacctacaagatgatcaaatgctctttgaggttttagataacaaggatggc
gagcaccttcgctctcatgcaggtgctatggtgataactcattcatcaaaatcttccaag
gaagactctattgatcttcatagccaaggatcatctgccagtcgatttaacatctctaat
gacaaatattattccaatcgaaaatcctcccagcaagccaaatcccatgctaaaaagcat
gcttttcttggtataaaagtcatgcattctgtacctgctttaaaactgcaaaccatgaag
ccaaagttgagcaataaggaacttgccaattttcatagacccaaagccttatggtaccct
catcacaacaaagttgctgctatgatacaaggagcaccttgcacccatggacccatgaaa
attattttaatgagcatgggagggaaaggaaagggaactaagcttactgtcaatgctgag
gaaactttgttgtctttcaaacagcgggcatctaagaagttagatttcaagctatcagag
aaagttaaagtatattattctggaagagagcttgaggaagacatgtctctggcagaacaa
caagtgcgaccaaattctgtgcttcaacttgtgcgtacaagaatccatgtgtggccacgg
gcccaaaaattgcctggtgagaataagcctctgcggcctcctggggcatttaagaagaaa
tctgagctatctgttaaagatggacatgtgtttctcatggagtactgtgaggagagacct
ttgcttctaggaaatgttgggatgggggctagactatgtacttattaccagaaaactgca
cccagtgacctaactgcttcatcactacgaaatggcaatgagggactggggaccgtgctt
acacttgatcctgctgacagatctccttttcttggagatataggtcctggttgcagccag
tcatgtcttgaaacaaacatgtaccgtgcacctgtatttcctcacaagttgtcttctacc
gactatcttttggttcgttcagcaaaagggatgctttcccttcgtcgcattgacaaatta
tatgttgttggacagcaagagcctcacatggaagtactttcccctggatcaaaaaatgtg
cagacatatcttgctaacaggatgatagtacatgtgtaccgcgagtttcgtgctaatgac
aagcctgactttcttccttatattcgagcagatgagttggctgctctgtttccaagccta
acagatgcctttgtacgcaaacgcttaaaacattgtgcagatttaaagaaagggaaaaat
ggacagttaatgtggggaagaagacgtgattttcgcattccatcggaggaagaattgaga
aggatgttgacaccagagaatgtttgctcatatgagagtatgcaagctggactctaccgg
ctcaaacgattgggaattagtaggcttacccaaaatgttggtctctcttcggcaatgaat
cagcttcctgatgaagctatttctttagctgctgcatcgcacattgagagggaattgcag
ataactccatggaatcttacaagcaattttgttgcttgtacaaatcagggtcgagaaaat
attgagcgcttggaaattacgggtgttggtgatccatcgggtcgtggactgggatttagc
tatgtccgtgtaacccccaaggctcctatttcaaatgcagtggtgaaaaagaaagcagct
gctgcacgggggggtccgaccgtcactggaactgatgctgatctccgcagattaagcatg
gatgcggcacgtgaggttctcttaaagttcaaagttccagaagagcgaattgataagtta
actaggtggcatcggatcgctatggtacgcaagctttcaagtgagcaagctgcatcagga
gttaaagttgatgcaatgaccctcagtaagtttgcacgtggccagaggatgtcctttctt
cagcttcaacagcaaactagggaaaaatgccacgaaatttgggatcgacaagttcagagt
ctttcggctgctgatgttgatgaaagtgatagtgacccagaagcaaatagcgatcttgat
tcatttgctggggatcttgagaatttgctagttgcagaagagtgtgaagatgatgatggc
accacagatttgagaggtgataaagctgatggtgttagaggtcttaaaatgagaagatgt
ccatctcaagctcaaactgaagaggaaattgaagacgatgaggcagaagctgtcattata
cgccgattgcttgaagatgatggggctgatataaagaagaagagaactaaactcaatgga
gtagaagtaggtcatggttctcatttagatcctgcaaatgctgagtgtaccaagaaaatc
aacactgtggttggacaaattgttagcaccccaaatcctgatggttcatttacctcaaag
gagttgatgacacaaaaacctaaggaggttgaaattttttttgctgaaaggagtctgtct
gggaaggtaaaacctaaaaagggtaatggagtgaatgatgacgtatctggattagtaaat
aagaaaagtgcttcagttaaagatggacttaaggttttcaaggaaaagaaacagcatgac
aaaccagtgagagaaaattttgtgtgtggagcatgtgggcagcttggacacatgcggacc
aacaagaactgccctaaatatggagaagatgcagaaacttcagaactagaaagtgtgtca
ggaaaatctaatcttcctgatgctgcaactcagctccaagtgaaaactccaaacaagaag
ttggtgcctaaaatgcttgcaaaagtggcagatgcagaagtaccagaaagtgttgaaagg
gcaggactgaagttgccgacaaagattctcccggtgaagttcaaatgcggcccagctgaa
aagccttgtgagaaaaacttgtcagggattcatacttctgataaacagattgtagatgca
gagggggcgaataaaccatcaggaaagatcaataaaataataatatctaataagtcgaat
tctggtgatgttcagaatgaaattcagaaatcctctgttcttatacgccttcctgttgac
acagaaaaagaacaatcacgcaagaaaatcatcatcaaacagccgaaagttaatactaac
gtggagcaagttaattctgccactgacactggaattgatcacgatttcagaaaaataaag
aaaattactgagttatcgagttttgagaagaagaaaaatcaggagagccagtggttcacc
gaagagacaagtaagagaaatctcatctatgacaggagattatgggatgaggaagagaaa
agaaaaaacaaggagaggatagtggaagagaaaactagtaggatgcttcaggaggaaaga
aggatgcaagaagaacacagattatttgaggccagaagatatccagaagcattcaggagg
gaggaaaggacaaagaagaagaagaaaaagaaaaaacatgatttcagagatgaatactta
ctggatcataggccatacagaaacgacagaaggatacctgaaagggatcgagctgcaaag
aggcgaccgatggccgatgctgatcagacagaatatgcaccattaacaaagcgtcgtagg
ggaggagaggttgagttatctaacatattggagagcatactcgatagcttgaaggaaact
atcgaaatatcgtatctttttctcaaaccggtaacgaagaaagaagcccctgactacctt
gacatcataaagcgcccaatggacctctccacgatcagagagaaggtaagaaacatggag
tacaagagccgggaggacttcaggcatgatgtttggcagatcgcttataatgcccacaag
tacaatgatggtcgaaacccaggcattcctccacttgctgaccagctcttggaactctgc
gattaccacctggaacagaagcatcacatgttaagcgatgctgaggctggaattgagttc
agggatatgtag
DBGET
integrated database retrieval system
