KEGG   Phoenix dactylifera (date palm): 103719239
Entry
103719239         CDS       T03274                                 
Name
(RefSeq) pre-mRNA-processing factor 17-like isoform X1
  KO
K12816  pre-mRNA-processing factor 17
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103719239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103719239
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Step II factors
    103719239
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_SCAP DExH14_plug
Other DBs
NCBI-GeneID: 103719239
NCBI-ProteinID: XP_008806604
UniProt: A0A8B7CUB5
LinkDB
Position
Unknown
AA seq 614 aa
MDLLQSYADKSDEEDGEPEESRREEGEEKGGEGGGGEGDVAAAAPASPDSDSFASPPRLL
PAKSAAPRVDDTTLALSAAGTARSLHRPIDPAEHAVVFNPTYDQLWAPIYGPAHPFAKDG
VPQGMRNHKLGFVEDASIHSFLFDAQYNTFHKYGYAADPSGLSYVGDVDTLDRNQALSVY
NIPQQEQKRRRLQMKAAAAEEDPDSTAAAAAGDGPDVDNPSSEEWLLKNRKSPWAGKKEV
VQGELTEEQKKYAQEHAEKKAEKERGGEGRGDRVEQVDKSTFHGKEERDYQGRSWIAPPK
DAKATNDHCYIPKRWVHTWSGHTKGVAAIRFFPKYGHLLLSAGMDSKVKIWDVFNSGKCM
RTYMGHSKAVRDICFSNDGAKFLSAGYDKNIKYWDTETGKVISTFSTGKTPYVVKLNPDE
DKQSILLAGMSDKKIVQWDMNSGEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW
EFGIPVVIKYISEPHMHSMPSISVHPNSNWLAAQSLDNQILIYGTKERFQLNKKKRFAGH
IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK
VATCGWDGMIKYWD
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggatctcctccaaagctacgcggacaagagcgacgaagaagacggagagccagaagaa
tcgcgacgagaagaaggagaagagaagggaggagaaggaggaggaggagaaggcgatgtt
gcggcggcggcccctgcctcgccggactcggactccttcgcctcccctccccggctcctc
ccggccaagtccgctgccccgcgggtggacgacaccaccctcgccctatccgccgccggc
actgcccgttccctccaccgccccatcgatccggctgagcacgccgtggtcttcaacccc
acctacgaccagctctgggcccccatctacggccccgcccaccccttcgccaaggacggc
gtcccccagggcatgcgcaaccacaagctcggcttcgtcgaggacgcctccatccactcc
ttcctcttcgatgcgcaatacaacaccttccacaagtatggctacgctgccgacccctct
ggcctctcctatgttggcgacgtcgacaccctcgaccgcaaccaggccctctccgtctac
aacatcccccagcaggagcagaagcgccgccgcctccagatgaaggcggccgccgccgag
gaagaccccgactccaccgccgccgccgccgccggcgacggccctgacgtcgacaaccct
tcctccgaggagtggctcctcaagaaccgtaagagcccctgggccgggaagaaggaggtg
gtccagggcgagctcaccgaggagcagaagaagtacgcccaggagcacgccgagaagaag
gccgagaaggagaggggtggcgaggggagaggagaccgggtcgagcaagtcgacaagagc
accttccatgggaaggaggagcgcgattaccagggccggtcgtggattgcacctccgaag
gatgccaaggccaccaacgaccactgctacatccccaagcggtgggtacatacgtggagc
ggccacacgaagggcgttgccgccatccggttcttccccaagtatggccacctcctcctc
tcggccggcatggactcaaaagtcaagatttgggatgtcttcaattcgggcaagtgcatg
cggacctatatgggccactcgaaggcggtccgggacatctgcttctccaatgatggtgcc
aaattcttgagtgccggatatgacaagaacatcaagtactgggacaccgagactgggaag
gtaatctcgaccttctccactgggaagactccctacgtggtgaaacttaaccccgatgaa
gacaagcagagcattcttcttgcagggatgagtgataagaagattgttcagtgggacatg
aatagtggtgagataacgcaagagtatgatcaacatcttggggctgtgaataccatcaca
ttcgtggataataaccggagatttgttacttcgagtgatgacaagtcccttcgtgtgtgg
gagtttggaattccagtggttataaagtatataagtgagccacacatgcattccatgcca
tcaatctctgtccatcccaattcaaattggctggcagcacagagcttggacaatcagata
cttatatatggcacaaaggaaaggtttcaactgaataaaaagaagagattcgcagggcac
attgtggcaggttatgcttgccaggtgaatttttccccagatggacggtttgttatgtca
ggggatggagaggggaagtgctggttttgggattggaagagctgcaaagtttttaggact
ttgaagtgccatgaaggagtgtgcattgggtgtgagtggcatccattggagcagagcaag
gtagcaacttgcggatgggatggcatgatcaaatattgggattag

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