Phoenix dactylifera (date palm): 103719402
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Entry
103719402 CDS
T03274
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103719402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103719402
Spliceosome [BR:
pda03041
]
Complex A
Other components
Complex A specific factors
103719402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
RRM_1
KH_1
SF1-HH
YycC
KH_12
eIF3g
KH_PNO1_2nd
RRM_7
Motif
Other DBs
NCBI-GeneID:
103719402
NCBI-ProteinID:
XP_008806841
UniProt:
A0A8B7CUR4
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Position
17:complement(14698881..14702498)
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AA seq
746 aa
AA seq
DB search
MGKQRVSVDQNSPIEIGCDDEHADVENQEPGEEDNLSEEEFCEEEPDEEPHKEEPNEEEK
PCEEELNQEEEPGEEEYTERETCDGKPTESEPSEALYNEPGEEHSSPNDCSNNEKHQLNS
SHSSSEKKRRSADRLEKQVEKRQKQDHDSKPEFYASPSGTDPQDKPSNLIDEVISSKEQE
NSGSSGKKRPRRWDTKSEADGAAFDGGVMATKKRKKRWVIDDSQLKMLGPLKLPDFVNWP
LTETLIDPEIQKLNAQLLEINQKLKARELVDDQKLITKLIEKRQKIISELIQRNPTFKPP
MDYKPAKLYRKLYIPVEEYPGYNFLGLIIGPRGHTQKRMEKETGARILVRGKGSAKGRKV
QQHTDAKYDPSENEDLHVYIEADTQQSLDAAVQLVEKLLVPVEEEMNEHKHAQLRELAEL
KGKVREDSSSRNEKAAFQTNVSCNICSDVAHLTAACPLTGSAPGARTNEHQVSFLAELGG
DGISFSNGLPVSSSTVPWTPNPASHSVPASSGKPFKEIDESKLFVGYLPRSVNTNKLIEL
FSPFGRISEAVVIKDKKAGLSKGYGFVRYTDPTFAAEAVRNMHGYRIEGKMLAVRVAGCP
PPTVNTNLEPGQPPSIIRLPTYPSSAAIAQRNPHVLDWPGPRGAMQPEAFDSFPKNSSFV
SHIGPVSEKSPVSYGASGQIPVLTSVISAPMTASREFEQFLSYVRGFNSQDYLYQSFPFE
VLPSPQVHFTRSFGSHHRPFLPVIPH
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcagagagtttcagttgatcagaactctcccatcgaaattggctgtgatgat
gaacatgctgatgttgagaatcaggagcctggcgaggaagacaacctgtctgaagaagaa
ttttgtgaagaagaaccagatgaagagccacataaggaagaaccaaatgaagaagagaaa
ccttgtgaagaagaacttaaccaggaggaggaacctggtgaagaagaatatactgagagg
gaaacctgtgatggcaagcccactgaatcagaaccaagtgaggcattatacaatgaacct
ggtgaggaacattcatcacctaatgattgcagcaataatgaaaaacaccagctaaattct
tctcactccagttctgagaagaaaagaagatcagcagatagattggaaaagcaagtagaa
aagaggcagaaacaggaccatgactcaaagccagagttttatgccagtcctagtggcact
gatccccaggacaagcccagtaacttgattgatgaggtaatcagttcaaaagaacaggaa
aattcagggagctctggtaagaaaagaccacgtagatgggatacaaagtcagaagctgat
ggggcagcatttgatggtggtgttatggctactaagaagaggaaaaaaagatgggtcatc
gatgacagccagttaaagatgctgggtcctctaaagcttcctgattttgtcaattggcct
ctaactgaaactctaattgatccggaaatccagaagttgaatgctcagcttcttgaaata
aaccagaagttgaaggcacgagaacttgttgatgatcaaaagttgattacaaagctcata
gagaagaggcagaagatcatttcagagttaattcagaggaatcctacttttaaacctcct
atggattacaagcctgcgaagctctacaggaagctgtatataccagtagaagaataccct
ggctacaactttcttggccttataatcggtccccgcgggcatacacaaaagagaatggag
aaggagactggagctaggattcttgtacgaggtaaaggttcagccaagggaagaaaggtc
cagcagcatacggatgcaaaatatgacccatctgagaatgaagacctgcatgtctacatt
gaggccgacacccagcagtctttggatgctgcagtgcagttggtggagaagctactggtt
cctgtggaagaagaaatgaatgagcacaagcatgctcagctaagagagcttgctgagttg
aaaggaaaagtcagagaggacagttcgagtagaaatgaaaaggcagcattccaaaccaat
gtgtcgtgcaatatctgtagcgatgtggcacatcttactgctgcttgccctttgacagga
tcagccccaggggcacggacaaatgagcatcaggttagctttcttgcagagctcggaggt
gatggaatctccttctctaatggcctaccagttagtagttccacggtaccctggacgcca
aacccagcttcgcattctgtaccagcatctagcggcaagcccttcaaagagattgatgaa
tctaaactattcgtgggttatcttccccggtctgtgaatactaataagctaatagagctt
ttttcacctttcggacgcatcagtgaagcagtggtaatcaaggacaaaaaagcaggttta
agtaaaggatatggttttgttaggtatactgatcctacctttgctgctgaggcagtgaga
aatatgcatggatacaggattgaggggaagatgcttgctgttcgagtagcaggatgccct
ccacctactgtcaataccaacttagagccagggcagcctccaagcattatccgtttgccg
acttatccaagttctgcagccattgctcaaaggaaccctcatgtgctggattggccaggt
cctcgaggagctatgcaacctgaagcttttgattcttttcctaagaacagcagctttgtt
tcacatattggtcctgtgagtgaaaagtcccctgtatcctatggtgcttctggccaaatt
ccagtcctgacttctgtcatttctgctcctatgacagcatccagggaatttgagcaattt
ctcagttacgtgagaggttttaattctcaggattatctgtatcagtcatttccttttgaa
gttctgccttccccacaggttcattttactaggtcttttggcagccaccacaggcctttc
cttcctgtaataccacattaa
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