| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
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| KO |
| K08736 | DNA mismatch repair protein MSH3 |
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| Organism |
pda Phoenix dactylifera (date palm)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pda00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103719424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:pda03400]
103719424
DNA repair and recombination proteins [BR:pda03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103719424
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
17:complement(14763610..14776862)
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| AA seq |
1106 aa
MGKPKQQVISRFFAPKSSSQNPPPSSSSSSPPLLPKLPHKISATVSFSPSKRPATLTPPS
SSPSSKKTKXPRHPLSPYNPSLHQKFLSKLLDPPSSSPSPSSTPQSLPPNPKYTPLEQQV
LELKSNHPDVLLMIEVGYKYRFFGDDAEIASRVLGIFAHVDHNFLTASIPTFRLNFHVRR
LVGAGYKVGVVKQTETAAIKAHGSNRLGPFSRGLSALYTRSTIEAAEDMGGGGEEGPGAE
SSNYLVCVVEKEASVGNKSCGIEGSFEVKIGVLAVEISTGEVIHGEFNDNGMRSGLEAAI
LSLSPAEILLGEPLSMATEKLLLAYAGPSSNVRVEHTSCDCFNDGGALAEVMSLYESVGD
DTLIAEHETQVLDMSKEENHHLGIEGIMSMPELAVQALALTIRYLKQFGLERILSLGASL
RPFSSTFEMTLSANTLHQLEVLKNNSDGSMEGSLLQAMNHTCTAFGSRLFKHWVTHPLCD
RNSIVARLDAVSEIAESMGSCRGSQNEIELERENLRNALVQPELDNILSSVLMMLGKSPD
IQRGITRIFHRTATASEVIGVIEAVLTSAKQLQNLRVEDNEEIVKSALLRRLICTASSST
IITHAAKLLSCLNKEAAEQRDVLNLFIAYGDQFPEVARGRLAVQMAEEKLDSLISQYRKQ
LGMRNLEFMSVSGTTHLIELSSEARVPSNWVRVSSTKKTIRYHPPEVLTALDKLLLAKEE
LAVACRTTWDNFLMGFSKYYTQFRAAVQALAALDCLHSLAILSRNQNYVQPIFFNSDEPS
QIRITSGRHPVLESILGDNFVPNDTNLHEDGEYCQIVTGPNMGGKSCYIRQVALIAIMAQ
VGSFVPASSAKLHVLDGIYTRMGASDSIQQGTSTFLEELSEASHIVHNCSSRSLVIIDEL
GRGTSTHDGVAIAYATLHYLLKQKKCMVLFVTHYPKILDIQKEFEGSVGAYHVSYLTSQK
PFKLTDSKSKFSVGESDQGEVTFLYKVVLGASDKSFGLNVARLAQLPSSCIARAAIMAAK
LEAEVSEWVGNGARNPKETPTQNEVGRNYSNSTGFSFREHDRYEKLGEVCHNLLSCIKSA
LDDAEPTNILHTLKDARELALKMISG |
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| NT seq |
3321 nt +upstreamnt +downstreamnt
atggggaagccaaagcagcaggtgatttcccgcttcttcgcccccaaatcctcctctcaa
aatccacctccctcctcctcctcctcctctcctcccctcctccccaaacttccccacaag
atctccgccaccgtctccttctccccgtccaagcgccccgcaaccctaacccccccctcc
tcctccccttcctccaagaaaaccaaanaccctcgccatcccctctccccctacaacccc
tccctccaccaaaaattcctctccaagctcctcgaccccccttcctcctccccctccccc
tcttccaccccccaatccctccctccgaaccctaagtacacccctctcgagcagcaagtc
ctcgagctcaaatccaatcaccccgacgtcctcctcatgatcgaggtcggctacaagtac
cgcttcttcggcgacgacgccgagatcgcttcccgggttcttggaattttcgcccatgtg
gaccataattttcttaccgccagcatcccgaccttccggctgaatttccatgttcgccgg
ctcgtcggggccggctacaaggttggcgtcgtcaagcagacggagacggcagcgatcaag
gcccacggttcgaaccggctcgggccgttcagtcgggggttgtcggccttgtacacgagg
tccacgatcgaggcggcggaggatatggggggtggtggcgaggagggaccgggggcggag
agtagtaattatcttgtttgtgttgtggagaaggaggcctcggtggggaataagagttgt
gggatcgaggggagtttcgaggtgaagattggggtgctggcggtggagatttcaactgga
gaggttattcatggggagtttaatgataatgggatgaggtcggggcttgaggcggcgatt
ctgagcttatctcctgctgagattcttcttggcgaacccctgtcgatggcgacagagaag
ctactattggcatatgctggaccctcatctaatgtccgagtcgagcatacatcgtgtgat
tgttttaatgatgggggtgcacttgctgaagtgatgtctttatatgagagcgtaggtgat
gatactctgattgctgaacatgaaacccaagttttggacatgagcaaggaggaaaaccat
caccttggaattgagggaatcatgtctatgcctgaattagccgtgcaagcattggcgttg
accatccgttaccttaagcagtttggtttggaaaggatattgtctttgggtgcttcattg
cgacctttttctagcacctttgaaatgactttatcagcaaatacacttcatcaactcgag
gtcttgaagaacaactcagatggttctatggaaggatcattactccaagctatgaaccat
acctgtactgcatttggttcaaggcttttcaaacattgggtgactcatcctttatgtgat
agaaactcgatagttgctcgtctcgatgcagtttctgagattgctgaatcaatggggtca
tgtagaggttcacaaaatgaaattgagcttgaacgggagaatctccgcaatgcacttgtg
caacctgaacttgataatattctttcttcagttttgatgatgttggggaagtcacctgat
attcaacgaggaataacaagaatttttcaccgcacagccacagcatctgaggtcattgga
gtcattgaggctgtcctaacctctgcgaagcaattacaaaaccttcgtgttgaggataac
gaggaaattgttaaatctgctttactcagaaggctaatttgtactgcttcatcatctact
atcatcactcatgctgcaaaacttttatcttgcctaaacaaggaagcagctgaacagcgt
gatgtgttaaatttatttattgcttatggtgatcagtttccagaggttgctagaggccgt
ctagctgttcagatggcagaagagaagctggattcattaatttctcagtaccgaaagcaa
cttggaatgcgcaacttggaattcatgagtgtatctggaacgacacacttgatagaactg
tcctcagaggcaagggttccatcaaactgggtcagagttagtagtaccaagaaaactatc
cgatatcaccccccagaagtcttgacagccttagacaaattgttgcttgccaaggaagaa
cttgctgttgcctgcaggactacctgggataattttttaatgggcttttctaaatactat
acccaatttcgagcagctgttcaagcattagctgcattggactgtctgcattcacttgcc
attctttcaagaaatcagaattatgtgcagccaattttttttaacagtgatgaaccaagt
caaattcgtatcacttcaggtcgtcacccggttctagagtcaatattgggagataacttt
gttccaaatgacaccaacttacatgaggatggtgagtactgtcagattgttacaggacca
aacatgggcggaaagagttgctacattcgccaagttgccctcatagctattatggctcag
gtcggttcctttgtaccagcatcatcagcaaagttgcatgtattggatggcatatatacc
cgtatgggtgcgtcagatagcatccagcaaggaacaagcaccttcttggaagaattgagt
gaagcttctcatatagtacataactgctcatcacgttcactggtcatcattgatgagctt
ggccggggcacaagcacacatgatggtgttgcaattgcttatgcaacactacattacctt
cttaagcagaagaaatgcatggttctttttgtcacccactatcccaagattttggatatc
cagaaagaatttgaagggtctgttggggcataccatgtttcctatctgacttcacagaaa
cctttcaaacttactgattcaaaatccaaatttagtgtcggggaatcagaccaaggagag
gttactttcctttataaagttgttcttggtgcatcagataagagctttggtcttaatgtt
gccagacttgcacagctaccatcttcatgtattgcacgagctgctatcatggctgcaaaa
ttagaagcagaggtaagcgaatgggtgggaaatggagcacggaaccctaaagaaacgcca
acccaaaatgaagtagggagaaactattctaattcaactggtttttcatttagagaacat
gatcgctatgaaaaattaggagaagtatgccacaatctgttgtcctgtataaaatctgca
ttggatgatgctgagccaacgaacatcttacacactttaaaagatgcaagagagcttgca
ttgaagatgataagcgggtaa |
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