Phoenix dactylifera (date palm): 103719678
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Entry
103719678 CDS
T03274
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103719678
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103719678
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
RICH
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103719678
NCBI-ProteinID:
XP_008807251
UniProt:
A0A8B7CVF5
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All DBs
Position
7:9312317..9342420
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AA seq
1259 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFHLDDFV
LPDSAYQGDFVDRHVSSKEQITLQDTMDGTGYSTSQFGLDERFGDGNASQIGLDLDEDLF
LDKHPSPQHASAPPGSDECTMHQGQSSFSLADMEIDEGKSGFDKDMGVETPKDLSELFNN
SDKNILPRNDGTSQCFEYNIQTPDLNEVLFRSDHIEGPTAVPNQVDFVRAADEVPSPELV
ECAQAPSTPGLLEETISATAHESPALSPRGKTSPLTEPKAVSLAQQCSSGFVGAPDEPHS
ECGQKSADNLCNDIVCDEVKDQPVANQVNENGETLPEVAPLDGLASVANTDVMIVASKLS
AENILEPGMPLTTNNTLLEDNAEPSVLGKQDHTEDIVPRSNNNAPLVNTDSHLRSCTSQL
NQANSLSPEDVVLVENTSELSQEPGGPSGTPAREEALHVSESSFYLQGEDFNMANAPNTG
LEVHQQSEHVPGVSKPNELSSGPISKDTPLDQLNCSSSSEFPEPEKMLLAPAGIVDQANE
LGQLTSEKGIIESDGSVNRLSSLSGKKRRLMDGTPILRNGTSTRMSGKPRIRRNTDFVPD
DDDLLASILVGKRTPVLRIGPTPPPTKAASLKRPRVTTRLGTPKRKVLLDDTTVLHADAI
RQQLINTEDIRRMRKKAPCTRPDIWIIEKSLLEDEVFNESIITGASVKLNSLHSRRYDSE
IDESHYRADPLKEVELSRSFEFVRETNGKEMAESIPVMPDKVDGEIQGPSGTSVTIERQF
SKDSSEYDAQEHLRSLPDLPQLDLSNNNPPSTITMAENNVQDRNAEVHMSIPTTALLRPE
CEITTDNGVEEIALHKNEHTAAFSKKIDDICMHSERQSQHESIQLANNLSEMNNKALYVT
ENTSFIGLAFAEDETRGASVLEGNGSVADAININCQQDAHADVGKNGHDETLVSVQDSCL
LEVEAGLQADLTSIRDSNCSIPDVGMENGETADPIGVTSHQTMEGKEDGLDAKVQDGAVV
QKDLNNEVNPFQPNTEIENVPSAVGENSGFQELNVEGGMDVESAPMEVAAAKECSDFSSA
VGGNDTEFLNVDDEADYDDAADHDLPNPEEAQSLEYSGWSSRTRGVARYLKTLFDEESGR
GRKIVAMDHLLVGKTRKEASRMFFETLVLKTRDYIHAEQENPFESINIKPRIKLLKSEF
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgttctactctcagtttattttggccaagaaagggccacttggaacgatatggatcgca
gctcatctggagcggaagctgaggaagaatcaggttgcggataccgatatcggtgtctca
gtagattctattctttttcctgaagttccaattgcacttcggttgtctagccatcttcta
ctaggtgtggtgaggatatattctcggaaggtcaattatcttttccatgactgcagcgag
gctctgctcaagataaaacaggcctttaggtcgactgcagttgatctccccccagaagaa
tctactgcaccctatcattccattactctgccagagacctttcatttggacgattttgtg
ctacctgatagtgcataccagggcgactttgttgaccgccatgtcagttccaaagagcag
attacacttcaagatacaatggatggcacaggatattcaacatcgcaatttggactggat
gaaagatttggcgatggaaatgcatctcagatcggcttagaccttgatgaggacttattc
ttggacaagcatccctcacctcagcatgcatcagctccaccaggctcagatgagtgtacc
atgcatcagggtcagtcctcattttctcttgctgacatggaaattgatgaaggtaaaagt
gggtttgataaggatatgggtgtcgaaactccgaaggatttgtctgaactttttaataat
tctgacaagaatatacttccaagaaatgatggcacttcacagtgttttgagtacaatatt
caaactcctgatcttaatgaagtgctttttcgaagtgatcatattgaaggccccactgca
gtacccaatcaagttgattttgttagggctgccgatgaagttccatccccggagttggtt
gaatgtgctcaggctccatctactcctggtttattggaagagacaatttctgccactgca
catgaaagtcctgctttgagcccacgagggaaaacttcaccattaactgaaccgaaggct
gtttctcttgcacaacaatgttcaagtggttttgtaggtgcacctgatgaacctcattct
gaatgtggacagaagagtgcagataatctatgtaatgatattgtttgtgatgaagtgaaa
gaccagccagttgccaatcaggttaatgagaatggggagacacttcctgaagtagctccc
ttggatggcctggcatctgtggctaatactgatgtaatgattgtggcttccaaattatct
gctgaaaatatactggaaccaggaatgcctttaactaccaacaacactttgcttgaggat
aatgctgagccatcagttctcggtaaacaagaccatacagaagatattgtccctcgttcc
aataacaatgcacctttagttaacactgatagtcatttgagatcttgcacttcacaactg
aatcaagccaattcattgtctccagaagatgtggttttagtagaaaacacctccgagctt
tctcaagaacctggcgggccttcaggaacccctgcgagagaggaggcacttcatgttagt
gaatcttctttttatttgcaaggtgaagatttcaacatggctaatgcaccaaacactggt
ctcgaggtgcaccagcaatcagaacatgtaccaggtgttagcaaaccaaatgagctatcg
tctggtcctatttctaaagataccccactagatcagttaaattgttcttcaagttccgaa
tttcctgaacctgagaaaatgcttttagctccagctggcattgttgaccaggctaatgaa
ttaggacagcttacatcagaaaagggcataatagagtctgatggaagtgttaacaggctt
agtagcctttctggcaaaaaacgccgtttaatggatggcacaccaattctgagaaatggc
acttccacaaggatgtctggcaaaccacgaattagaagaaacactgattttgttcccgat
gatgatgatctgttggcatcaattttagttggaaaaaggactccagtcttgaggataggg
cctactccaccacccaccaaagcagcttctctaaaacgccctagggtaacaaccagacta
ggcacgccgaaaagaaaggtgctactggatgatactacagtcttacatgctgatgcaata
cgacaacaattgataaataccgaagacatccgccgcatgcgaaagaaggctccatgtact
cgtcctgatatttggattattgagaaaagtttattagaagatgaagttttcaatgaatct
ataattactggtgcatcagtaaagctgaacagcttacacagtcgaagatatgattcagaa
attgatgaatctcattatcgtgctgacccattaaaagaggttgagctttctagaagcttc
gagtttgttagggaaactaatgggaaagaaatggccgagtcgattcctgttatgccagac
aaagttgatggtgaaatacagggaccatcaggcacatctgtaacaattgagagacagttt
agcaaagactccagtgaatatgatgctcaagagcatttaagatccctacctgatctgcct
caactggatttatcaaacaataacccgccgtctacaattacaatggcagaaaacaatgtg
caggacagaaatgctgaagttcacatgtccatacctacaactgcacttttgaggcctgaa
tgtgaaatcaccactgataatggagttgaagagattgcacttcataaaaatgaacatact
gctgcattttctaagaagattgatgatatatgcatgcattcggagcggcaatcacagcat
gagtcgatacaactggccaataatctctcagagatgaacaataaagcattatatgtaact
gaaaacacttcatttataggcttggcttttgctgaggatgaaaccagaggagcttctgtc
ttggagggaaatgggagcgtagcagatgcaataaatataaactgccaacaagatgctcat
gctgatgttggcaagaatgggcacgatgagacattagtctctgtacaagacagttgtttg
cttgaagttgaggcaggtttacaggcagacttgacttccattagagattcgaactgttct
atcccagatgtgggcatggaaaatggtgaaactgctgacccaattggtgtaactagtcat
cagaccatggagggcaaggaagatggtttagatgctaaagtacaggatggagctgtggtg
cagaaagacttaaataatgaagtaaacccattccaaccaaatacagaaatcgaaaatgtt
ccatctgcagttggagaaaattctggctttcaggaacttaatgtagagggtggtatggat
gtggaaagtgctcccatggaagttgctgctgcaaaagaatgtagtgattttagcagtgca
gttggtggcaatgatacagagtttcttaatgtagatgatgaagcagactacgatgatgca
gcagatcatgacttgccaaatcctgaagaggcccaatcacttgaatacagtggatggtct
tctcggacaagaggtgtcgcgaggtatttgaaaactttgttcgatgaagaatctggacgt
ggcagaaaaatcgttgccatggatcaccttttagttggtaaaactcgcaaagaagcatca
agaatgttctttgagactttggttctgaaaacgagggattacattcatgcagaacaggaa
aacccttttgaaagcatcaacatcaaaccaagaataaagctcctaaaatcagagttctaa
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