Phoenix dactylifera (date palm): 103719685
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Entry
103719685 CDS
T03274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Module
pda_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103719685
Enzymes [BR:
pda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103719685
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
PGM_PMM_I
Motif
Other DBs
NCBI-GeneID:
103719685
NCBI-ProteinID:
XP_008807270
UniProt:
A0A8B9AD40
A0A8B7CVG3
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MAKLITLFLLQLFLLCFLPRSNAVYDVLNFGAKADGKTDSAQAFLKAWTAACGSSSPATL
YVPAGSFLLSQATFNGPCKNTAIKFSIHGKIAAPSNYRKLGASGKWITFDDVDGVTISGG
ELDGRGADLWTCKLDGRSCPTGATSLTFSNSKNIVIDGLASINSELYHIVILGCQGVRVQ
GVYITAAGNSPNTDGIHVQMSTGVSIVQATIKTGDDCISIGPGTSNLWIERVFCGPGHGI
SIGSLGKEGQGLEEEGVENVTVKSAVFTGTQNGFRIKTWATNVRGYVKGVVFSDASMRNV
QNPIIIDQSYCPGNKNCPDQNSRVGISHVKYKNIRGTSATKDAVNFDCSPSNPCNGIRLK
NIKLTYQNEQAKSKCKHAYGIATGSVIPPSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagctcattaccttgttcctgctccaactatttctcctctgcttcctaccaaga
tcaaatgcagtctacgatgtgctaaattttggggcgaaagctgacgggaagactgactcg
gcgcaagcattccttaaagcttggacggcggcgtgcggctcatcttccccggccaccctc
tacgtgcccgccgggagtttcctactaagccaagccaccttcaatggcccatgcaagaac
actgcgatcaagttttcgatccatggcaagatcgccgcaccttcgaactacagaaagtta
ggtgcttctgggaaatggattacgtttgatgatgttgatggcgtgacgatcagcggcggc
gaactcgacggaagaggggcagatctgtggacctgcaaacttgatggccggagctgccca
accggtgcaacttcgctgaccttcagcaactcgaaaaacattgtgatcgatggcctagcg
tcgatcaacagcgagctgtatcacatcgtcatcctcggctgccaaggagtgagggttcaa
ggcgtttacatcactgcggcggggaacagcccgaacaccgacggcatccacgttcagatg
tccaccggcgtcagcatagttcaggccaccatcaagaccggcgatgactgcatctccatt
ggtcctggcacctccaacctttggatcgagcgtgtgttctgtggaccagggcacggcatt
agcattgggagcttaggcaaggaggggcagggacttgaggaggaaggcgtggagaatgtg
accgtaaaatctgccgtatttacgggcactcaaaacgggtttaggattaagacgtgggca
acaaacgtccgtggctatgtgaaaggagtcgtcttttctgatgcatcaatgcgaaatgtc
caaaatcctattatcattgatcagagctattgccctggaaacaaaaattgccctgaccag
aactcgagagttggaatcagtcatgtgaagtacaaaaacattcgagggacctcggcaaca
aaagacgctgtgaattttgattgtagtccaagcaatccatgcaatggaattagattgaag
aacattaagctcacctatcaaaacgaacaagcaaaatctaaatgcaagcatgcttatgga
attgccaccggttctgtcatcccaccaagttgtctttga
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