Phoenix dactylifera (date palm): 103719890
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Entry
103719890 CDS
T03274
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X2
KO
K14962
COMPASS component SWD2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103719890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103719890
03036 Chromosome and associated proteins [BR:
pda03036
]
103719890
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103719890
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
103719890
COMPASS/SET1 complex (yeast)
103719890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
PQQ_2
eIF2A
KNTC1_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_NWD2_C
VPS11_N
IML1
Motif
Other DBs
NCBI-GeneID:
103719890
NCBI-ProteinID:
XP_008807586
UniProt:
A0A8B7CW00
LinkDB
All DBs
Position
2:complement(2980597..2989130)
Genome browser
AA seq
331 aa
AA seq
DB search
MPGGALEREERVSMELTDEVLKSMEVGMAFRDYNGRISSMDFHRTTNHLVTASDDESIRL
YDVQNAVCLKTINSKKYGVDLVCFTDNPATVIYSSKNGWDESLRLLSLNDNKYLRYFKGH
HDRVVSLSLCPHREYFISGSLDRTVLLWDQRTEKAQGLLRVQGRPAVSYDDQGMVFAIAF
GGYIRMFDARKYEKGPFDIFPVGGDNLEANVVKFSNDGRLMLLTTTDGHVHVLDSFRGTV
ISTYNVKPVSSKATLEASFSPDGMYVVSGSGDGSVYAWSVRSGKVACWASTDTEPPLIKW
APGSLMFTTGSSELSFWVPDLSKLGSFAGIK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcggggcgctggagagggaggagagggtgtccatggagctgacggacgaggtg
ctcaagagcatggaagtcggcatggccttccgagattacaacggcagaatcagttccatg
gattttcacaggactacaaatcatctggtaacagccagtgatgatgaatcaattcgcctt
tatgatgttcaaaatgctgtgtgtttaaagaccatcaacagcaagaagtatggtgttgat
ttggtttgcttcactgataatccagcaacagttatatactcttcaaaaaatggttgggat
gaatctctgcggctgctttctctgaatgataacaagtacttgcggtacttcaaagggcac
catgacagggttgtctctctgtcactctgtcctcatagggaatacttcatctctgggtct
cttgatcggactgttttactatgggatcaaaggactgaaaaggctcagggccttttacgt
gtgcaaggaagacctgcagtttcttatgatgaccaaggaatggtttttgcaattgcattt
ggaggctacatacgaatgtttgatgctcggaagtatgagaagggcccttttgatatcttt
cctgttggaggagacaatttagaagccaatgtggtaaagttcagcaatgatggcaggctt
atgctattgactactactgacgggcatgttcatgttcttgattcttttcggggcactgtt
atatccacatacaatgtgaaaccagtttcaagcaaggcaacattagaggcatccttcagt
ccagatggaatgtatgttgtatcaggttctggtgatgggagtgtttatgcttggagtgtc
agaagcggcaaagttgcatgctgggcaagcactgatactgaaccacctctgataaagtgg
gctccaggaagtctcatgttcactactggatcatctgagttgtcattttgggtcccagat
ttatcaaagttgggatcctttgctggcattaagtag
DBGET
integrated database retrieval system
