Phoenix dactylifera (date palm): 103720047
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Entry
103720047 CDS
T03274
Name
(RefSeq) tRNA pseudouridine synthase A 1 isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103720047
Enzymes [BR:
pda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103720047
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103720047
Prokaryotic type
103720047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103720047
NCBI-ProteinID:
XP_008807793
UniProt:
A0A8B7CWC5
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MGFAAIGFSSSPLRALSLSNPSRLEGGGEEQNHHPAKLTLPCSHKWRIVIAYDGTKFSGW
QYQRSPPTIQYLIESALIRITKLDRKELRLVGASRTDTGVHAWGQVAHFVTPFTYDGLQS
LHAAMNGLLPPEIRVREISPALPEFHARFSTKSKTYHYKIYNNPIMDPFLSLYAYHSAHK
FNPASMREAAAYFVGKHDFSSFANASHNDRLPDPVKEIFRFDINEMGAVLQLEVEGTGFL
YRQVRNMVALLLQIGREALPPNVVPKILAAQDRRELAKFALSAPPHGLCLMSVNYEHEIL
KPPEGGPDISFGRTHQVSRCAGAEKHALLEH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgcggccattggcttctcttcttctcctcttcgcgccctctctctctcaaac
ccttcgcgtttggagggtggtggagaggagcagaaccaccacccggcgaagctgaccctt
ccctgttctcataaatggcggatagttatagcctacgacggcaccaagttctcaggctgg
cagtatcagcggtctcctccaaccatacagtatcttattgagagtgcgttaatacgcatc
acaaagctagaccgtaaggaacttcggttggttggtgcaagcaggacagatactggcgtt
catgcctggggtcaggttgcacactttgtcacacctttcacctatgatggtttgcaaagt
ctccatgctgcaatgaacgggcttcttcctcctgaaatccgagttagggaaattagtcct
gcacttcctgaatttcatgctcgtttctccacaaagagcaagacttatcactacaagata
tataataatccaattatggatccttttctgtctctttatgcctaccatagtgctcataaa
ttcaatcctgcctctatgagggaggctgcagcatatttcgttggaaagcatgacttttca
tcttttgcaaatgcatcacacaatgaccgcctgccagatcctgtgaaagaaatctttcgt
tttgacatcaatgaaatgggtgctgttttgcagcttgaggttgaaggaactggtttctta
tacagacaagtgagaaacatggtagctttgctacttcaaattggaagagaagcattgcct
cccaatgttgttccaaagatcctagctgctcaggatcgtagagagcttgcaaagtttgca
ttatcagctccacctcatggattatgtctcatgtctgtcaactatgagcatgaaattcta
aaacctcctgaaggtggcccagatatcagttttggcaggactcatcaagtgagtagatgt
gctggggctgaaaagcatgcattgttggagcattag
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