Phoenix dactylifera (date palm): 103720101
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Entry
103720101 CDS
T03274
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103720101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103720101
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103720101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
103720101
NCBI-ProteinID:
XP_038990450
UniProt:
A0A8B9AVD6
LinkDB
All DBs
Position
16:1041033..1057288
Genome browser
AA seq
793 aa
AA seq
DB search
MVPDAGAEDEEKWLAEGIAGLQHNAFYMHRSLDSNNLRDALKFSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEMFFREETKRGSFSVIDLYELVQHAGNILPRLYLLCTVGSVYIKS
KEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQISRDKLPDIGSEYEGDADTVVDAVEF
VLQNFTEMNKLWVRMQHQGPIREKEKREKERSELRDLVGKNLHVLSQLEGVDLDMYKETV
LPRILEQVVNCKDDIAQHYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPTVDIKTVLSQL
MDRLSNYAASSAEVLPEFLQVEAFAKLSSAIGKVIEAQVDMPIVGAITLYVSLLTFTLRV
HPDRLDYVDQVLGACVKKLSGKAKLEDSKATKQIVALLSAPLEKYNDIVTALKLSNYPRV
MDHLDNGTNKVMAVVIIQSIMKNSTCISTADKVEALFELIKGLIKDMDGTPDDELDEEDF
KEEQNSVARLIHMLYNDDPEEMLKIICTVRKHILLGGPKRLPFTVPPLVFSSLKLVRRLQ
GQDGDVIGEEVPATPKKIFQILHQTIEALSLVPSPELALRLYLQCAEAANDCDLEPVAYE
FFTQAFILYEEEVADSKAQVTAIHLIIGTLQRMNIFGVENRDTLTHKATGYSAKLLKKPD
QCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGSVTLFIEI
LNKYLYFFEKGNPQITSSVIQGLIELINTEMQSDNTTSDPSADAFFASTLRYIQFQKQKG
GAMGEKYEPIKIN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtgccggacgccggcgcggaggacgaggagaagtggctggccgagggcatcgccggc
ctccagcacaacgccttctacatgcaccgctctctggactccaataacctgagggatgct
ctcaagttctccgcccagatgctctcggagctgcggacttcccggctctccccgcacaaa
tactacgagctttacatgcgggcttttgatgagttgcggaagctggagatgttcttcagg
gaggagaccaagcgtggcagcttctccgtgatcgatctgtacgagctcgtgcagcatgcg
gggaacatcttgcccaggctgtatctcctctgcacagtaggatctgtatacatcaaatca
aaggaggcacctgccaaggatgttcttaaagaccttgtagaaatgtgccgtggcattcag
catcctgttcgtggacttttcttaagaagttacctctctcaaatcagcagggacaagttg
cctgatattggttctgagtatgaaggggatgctgacaccgttgtggatgctgttgagttc
gtacttcaaaacttcacggagatgaataaactctgggtccggatgcaacatcaggggcct
attcgggaaaaagagaagcgggaaaaagaaaggagtgaacttcgtgatcttgtcggcaaa
aaccttcatgttctcagccagttagagggtgttgatcttgatatgtacaaagaaaccgtt
cttcccagaatattggaacaggttgtcaattgtaaagatgatattgcccagcattacttg
atggattgtataatccaagtttttccagatgagtaccacttgcagactcttgaaacatta
ttaagtgcattcccccagcttcagccaacagttgacatcaaaacagtactatctcagctt
atggataggttgtcaaattatgctgcctcaagtgcagaagtattaccagagttcttgcaa
gttgaagcttttgccaaattgagcagtgccattggaaaggtgattgaagcacaggttgac
atgcctatagttggagcaataactctatatgtgtcccttctgacgtttactcttcgtgta
catcctgatcggcttgattatgtggatcaagtactgggagcatgtgttaagaaactttca
ggcaaagcaaagcttgaggatagcaaagcaactaagcaaattgtcgcacttctgagtgct
ccactggagaagtataatgatattgttactgcattgaagctttctaactatccccgtgtc
atggatcacttagataatgggacaaacaaagtcatggctgtggtgattatccaaagcatc
atgaaaaacagtacctgcatatcaactgctgataaagtggaagctctatttgaattaata
aaagggcttataaaggatatggatggaaccccagatgatgagcttgatgaagaggatttt
aaagaggagcagaactctgttgctcgactcattcacatgctgtataacgatgatcctgag
gagatgttgaagatcatatgtactgtgaggaagcatattcttcttggaggtcccaagcgc
ctgccttttactgtacctccccttgtcttttcttctctaaagttggtacgacgtttacaa
ggtcaggatggagatgtcattggagaagaggtccctgcaacaccaaagaaaatatttcaa
attttacatcagactattgaggccttgtcattggttccttctccggaacttgcattaagg
ttatacttgcaatgtgcagaggctgccaatgattgtgatcttgaacctgtggcatatgaa
tttttcactcaggcatttatactgtatgaagaggaagtcgcggattcaaaagcccaagtt
actgcaattcacttaatcataggaactcttcagcggatgaatatatttggggtggagaac
agagacactctgacacacaaggccacagggtattctgcaaaacttttaaagaagcctgat
cagtgcagagcggtttatgcatgctcgcatctcttttgggttgacgatcaggatggcatc
aaggatggagaaagggtcctgctttgcctaaagcgtgccttgaggattgcaaatgctgct
caacagatggctaatgtaacaaggggtagcagtggatctgtcaccttgttcatcgaaata
ctgaacaagtacctatacttctttgagaaaggaaacccacagattacaagttctgtaatt
cagggtcttattgaattgatcaatactgagatgcaaagcgacaatacaacgtcagatcct
tctgctgatgctttctttgcaagcacactgagatacattcagtttcagaagcaaaaaggt
ggcgcaatgggtgaaaaatatgaacccataaaaattaactaa
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