Phoenix dactylifera (date palm): 103720121
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Entry
103720121 CDS
T03274
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
pda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103720121
03083 Polycomb repressive complex
103720121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103720121
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103720121
Histone modification proteins
HAT complexes
HATB complex
103720121
HDAC complexes
Sin3A-HDAC complex
103720121
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103720121
PRC2.2
103720121
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103720121
Heterochromatin formation proteins
Other heterochromatin formation proteins
103720121
Chromatin remodeling factors
NuRD complex
103720121
NuRF complex
103720121
NuRF complex (fruit fly)
103720121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Gbeta
WDR55
DNAI3_WD
Beta-prop_WDR36-Utp21_1st
EIF3I
DSE1_N
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
103720121
NCBI-ProteinID:
XP_038987176
UniProt:
A0A8B9AKC6
LinkDB
All DBs
Position
11:2582800..2594555
Genome browser
AA seq
467 aa
AA seq
DB search
MRERGKAEQPTVDERYTQWKTLIPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEVQPNRHAVLGAADSRPDLILTGHQENAEFALSMCPSD
PFVLSGGKDKLVVLWSIQDHISTLAESSAAKSPATPASSSGKQPAKAGNEKSSDSPTVGP
RGVYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGTAPAIKVEKAHNADLHCVD
WNPHDENLILTGSADNSVRMFDRRNLTSGGVGTPIYKFEGHKAAVLCVQWSPDKASVFGS
AAEDGLLNVWDHEKVGKKKERVGTRMPNSPPGLFFQHAGHRDKVVDFHWNSSDPWTIVSV
SDDGESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKSHILTCASNS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagaggaaaggcggagcaacccacagtggacgagcggtatacccaatggaag
accctcatacccgtcctctacgactggctcgccaaccacaacctcgtctggccctccctc
tcctgccggtggggtccgcagctcgagcaagcaacgtacaagaatcgtcaacgtctgtat
ctttctgagcagactgatggcagtgttcctaatactctcgtcatcgcaaattgcgaagtt
gtcaaaccaagggttgcggctgcagagcatatctcccagtttaatgaagaagcacgctct
ccctttgttaaaaagttcaaaactatcatacatcctggggaggttaacagaatcagagag
cttcctcagaacagtaagatagtggcaacacatactgacagccctgatgtacttatctgg
gatgttgaggtgcagcctaatcgtcatgctgttttaggagctgctgactctcgtccagat
ttgatattgacaggacatcaagaaaatgcagaatttgcactttccatgtgtccttcagat
ccttttgtactttccggagggaaggacaaattggtcgttctgtggagcattcaagatcat
atctccacgttagcagagtcgtcagctgctaaatctcctgcaacacctgcaagctcaagt
gggaagcagcctgcaaaagctggtaatgagaaaagctcagacagtcctacggttggacca
cgaggcgtataccaagggcatgaagatactgttgaagatgtgcaattctgtccttctagc
gcacaggaattctgtagtgtcggtgatgattcttgcctcattctttgggatgcccgaact
ggtactgccccagccatcaaggttgaaaaggctcacaatgctgatcttcactgcgttgat
tggaacccacatgatgaaaatcttattttaactggatctgctgataattctgttcgtatg
ttcgatcgccggaacctaacttctggaggtgttggaacaccaatatataaatttgaaggc
cacaaagctgctgttctttgtgtacagtggtctcctgataaagcatcagtttttggaagt
gccgcagaggatggcttgctcaatgtttgggatcatgagaaggttggcaagaagaaggaa
cgtgttggaacgaggatgcccaattcacctcctggtttattctttcaacatgcagggcac
agagataaagtcgtagatttccattggaattcatctgacccatggaccattgttagtgtc
tctgatgatggtgagagtactggtggcggtggtacattgcagatatggcgcatgagtgac
ttgatatacaggccagaagaggaggttctggctgagctggagaagtttaaatcccacatt
ttgacatgtgcatctaattcgtaa
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integrated database retrieval system
