Phoenix dactylifera (date palm): 103720214
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Entry
103720214 CDS
T03274
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103720214
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103720214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
103720214
NCBI-ProteinID:
XP_038981525
UniProt:
A0A8B9A4G7
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All DBs
Position
4:13462347..13486621
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AA seq
836 aa
AA seq
DB search
MGKVKGKQRQDRFYHLAKEQGYRSRAAFKLLQLDAKYRFLPSSRSILDLCAAPGGWLQVA
VRHAPVGSFVVGVDLFPIRPIRGAHALVEDITTPRCRAAIKRLMDSNGCSAFDIVLHDGS
PNVGGAWAQEATSQSSLVIDALRLATNFLAPKGTFVTKVFRSQDYSAIIYCLKKLFEKVE
VTKPVASRSTSAEIYVIGSRYKAPAKIDPRLLDVKHLFQGAIEPPKVVDVLRGSKQKRNR
EGYEEGNTTLWKVGLASNFIWSEEPLEFLGSVNALSFDDPACLSIKDHELTTDEIKSLCE
DLYVLDKNSFKHLLKWRLRIRKALSSTEKVAAKTTDVEDDTKGNEDDRLLNEMEELTYAL
ERKNKKAKKRLAKRRTKDKARKAMGMQIDATEDSYFDQDLFSLSSIKGKKELQAIDSVEL
EEGGNDIRDSESEETHAAVGHGHSSSEMDSDEEQRRYDEQLEEMLDEAYERYVSRKGGST
KQRKRAKLVISSEDGLLEGADDNVIHSDQDSDQYQSDKEKNPLMVPLIEEEQPTQEQIME
QWFSQDVFTESAGVFEKSDSEEEREEKSLVLKKPEKIFTFPKDASLPTTQPPQQDDGFEI
VPAEPMETSDDSSSSSDDSDEDDEDTKAEILAYAKKMLRKKQREQILDDAYNKYMFDDEG
LPKWFAEEEKRHCQPMKPVTREDIAALKAQFREIDARPAKKVAEAKARKKRAVMKKMEKA
RRKANSIADQTDISERSKGKMIDQIYRKAVPKKPQKEYVVAKKGVQNKAGKGKVLVDRRM
KKDSRSRGLGMPGKGGFKKGKGVKGKVKGPKGKNSAKSSGKKAGKGQKGRKGAVHG
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtaaagggaaagcagcggcaggacaggttctaccatctcgccaaggagcag
ggctaccgctctcgggccgccttcaagctcctccaactcgacgccaaataccgcttcctc
ccctcctcccgctccatcctcgacctctgcgcggcccccggaggatggctccaggtcgcc
gtccgccacgcccccgtcggatccttcgtcgtcggcgtcgacctcttccccatccgcccc
atccgcggcgcccacgccctcgtcgaggacatcaccaccccgcgatgccgcgccgccatc
aagcgccttatggactccaatgggtgttccgccttcgacatcgtcctccacgatggctcc
cccaacgtcggtggtgcctgggcgcaggaggccacctcccagtcatccctcgtcatcgat
gcccttcgcctggcgaccaatttcctcgccccaaagggcaccttcgtcaccaaggttttc
aggtcacaggattatagtgccatcatatactgtctcaagaagctttttgagaaagttgag
gtgactaaacctgtggctagtcgatctacatctgcagaaatttatgttattggttccagg
tataaggcccctgcaaagattgatccacgtcttcttgatgtgaagcacttgtttcaaggg
gctattgagccccctaaggttgtagatgttcttagaggatcaaagcaaaagagaaatcgt
gaagggtatgaggagggaaatactaccttgtggaaggtgggtttagcttcaaactttata
tggtcagaagaaccactggagtttctgggttcagtcaatgcgttatcatttgatgatcca
gcttgtttatcgatcaaagatcatgaattgactacagatgagattaaatctttatgcgag
gatttgtatgttctggataaaaatagcttcaagcatctcttgaagtggcgcctacgcata
agaaaggcattgtcatctactgagaaggttgctgcaaagactactgatgttgaagatgac
acaaagggcaatgaggacgaccgcctactaaatgaaatggaagagttaacatatgctttg
gaacgaaagaataagaaagcaaaaaagcgtcttgcaaaacgccgaacgaaggataaagca
cgcaaagcaatgggaatgcaaattgatgctactgaagatagttactttgaccaagatttg
ttttctctttcctctatcaaggggaagaaagaactgcaagcaattgactctgtagaactt
gaagaaggtggcaatgatatccgagacagtgaaagtgaggaaactcatgcagctgttggt
catgggcattcttcgagtgaaatggactctgatgaagaacagaggaggtacgatgaacaa
ctcgaggaaatgcttgatgaagcttatgaacgatatgtgagtagaaaaggaggaagtact
aaacaacgcaaacgtgcaaaattggttatttctagtgaggacgggttgttagagggagct
gatgacaatgtaattcattctgatcaagattctgatcaatatcagagtgacaaagagaag
aatcctctcatggtacctttgattgaggaggagcagccaactcaagagcaaattatggag
cagtggttcagtcaggatgtattcactgaatcggcaggtgtgtttgaaaaaagtgatagt
gaagaagagagggaggagaaatcacttgttcttaaaaagcctgagaaaatcttcaccttc
ccaaaggatgcaagcctccctacaacacaaccccctcaacaagatgatggttttgagatc
gtcccagcagagcccatggaaaccagtgatgactcgtcatcgtcctctgatgattcggac
gaggatgatgaggacacaaaagctgaaatattagcgtatgcaaagaagatgttgaggaag
aagcagagggaacaaattcttgatgatgcctacaacaagtacatgtttgatgatgaaggt
ttgcctaagtggtttgcagaggaggagaagaggcactgtcaacccatgaagccagtgact
cgagaggatattgctgctttgaaggcgcagtttagggagattgatgcgcgcccagctaag
aaagtagcagaggccaaagcacgtaagaagcgagctgtgatgaagaagatggagaaggct
cgccggaaggcaaattccattgctgaccagactgacatatctgaaagatcaaagggaaag
atgatcgatcagatttacaggaaggcagtgccaaagaagcctcagaaagagtatgtagtt
gcaaagaagggagttcaaaacaaggcaggtaaaggaaaggtgctagtggacaggcgcatg
aagaaggattcaaggtctcgtgggttgggaatgcctggaaagggtggatttaagaagggt
aaaggtgtgaaggggaaagtaaagggtcccaaaggcaaaaactctgcaaaatcgtctggt
aagaaggcagggaaagggcagaagggacgcaagggggccgtgcatggctga
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