Phoenix dactylifera (date palm): 103720227
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Entry
103720227 CDS
T03274
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103720227
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
103720227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
103720227
NCBI-ProteinID:
XP_008808057
UniProt:
A0A8B7CX52
LinkDB
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Position
15:7469945..7476826
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AA seq
789 aa
AA seq
DB search
MEGAAPLLPRPSDLSAPLRRLLAERLRAEDDLSRSPDLEVELRGRCSDLEASLSDLGRRL
SESIAAYAYRSEEFGGRLGEVRAGLIDLWSSIAGPSVGGGEEQGGGRSQQIHAEELPVLA
KEVARVETVRAYAETALKLDSLIGDVEDAVSSSVTAKLRSPHAVNSEEVRLSVIESLKQI
EDILTSVIKTRSQWARLVSAVDHRVDRALAVLRPQAIADHRSLLASLGWPPLLSSSNLAN
PERGKSAESVNPLISMKGDLKGKYCDSFLSLCNLQELQRRRKSRQLEGHNLEIALHQPLW
VIEELANPISITWVRHFSKWVEKPEFIFALVYKITRDFVDSLDEILQPLVDKAKLVGYSC
REEWISAMVTALSTYLSKEIFPKYVDLLQEGSSSGVSSQARISWLHLVDLMISFDKRMHS
LITNAGLLLSLREDENLQRVTILCVFCDRPDWLEIWSEIELREMLDKLKPVMQEEKSWKS
RLEGTVLMSGSEDYRSPAVSGAVIQALSLLIDRSRPLPSIALRARFVRLAGAPLVREFLD
CLLRRCQEAEGLTALADDDAILRVSQSINAARYAESILTEWCEDVFFLEMEAVSDEDTGG
GCIFEDEMGGLKEFRTEWVEKISTVILRGFDARCRDYFKNKKQWQEKTEGLAVSRTFIGA
LDYLEGKISKLDQSLNPMDFVAVWRGLAGGVDQLILSGVFMSNAKFHNGGVERLGVDLEV
LFRVFAAWCLRPEGFFPKLCEGLRLLKMEERQLKDEMSRAKERWLRENGIRHLTLSEALK
IVKNRVFVG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccgcgccgctgctgccccgcccgtccgacctctccgcccctctccgccgc
ctcctcgccgagcggctccgcgccgaggacgacctctcgcgatcccccgatctcgaggtg
gagctgcggggccggtgctcggatctcgaggcgtccctgtccgatctgggccgccggctc
tcggagagcatcgccgcctacgcttaccgatcggaggagtttggcggccgcctcggcgaa
gtccgcgcgggactgatcgatctctggtcgtccatcgccgggccatcagtaggtggagga
gaagaacagggcggggggaggagccagcagatccatgcggaggagctgccagtgcttgcg
aaggaggtggcgagagtggaaaccgttcgagcttatgctgagactgcattaaagctcgac
agtctgattggtgatgttgaagatgcagtttcttcttctgtgacagcaaaacttagatct
cctcatgcagttaactcagaggaagttcgcctgagtgtcatcgagtctctcaagcaaata
gaggatatcttaacgtctgttataaaaacaaggtctcagtgggctcgtcttgtctcagct
gtagatcacagagttgaccgagctttagctgttcttcgacctcaagcaattgcagatcat
cgatctcttctagcatcccttgggtggcctcctctgcttagcagttcaaatcttgcaaat
ccagagagaggaaaatcagctgagtctgtcaatcctcttatctcaatgaagggggacttg
aagggcaaatactgtgatagtttcctctccctgtgcaatttgcaggagttgcagagacgg
agaaaatctcgacaactggaaggacataatttggagattgcattgcatcaaccactgtgg
gtcatagaagagctagcaaatccaatatccatcacatgggtacgccatttctcaaagtgg
gttgagaagcctgagttcatttttgcacttgtttataagattacaagggactttgtagat
tcactggatgagatattgcaaccgctagtagacaaggccaagcttgtgggttatagttgc
agagaggagtggatttcagcaatggtgactgcattatctacttatttgtcgaaagagata
tttcctaagtatgttgatcttctacaggaaggcagttcaagtggtgtttcatcacaggct
agaatctcatggcttcatcttgttgacttaatgatttcttttgataaacgaatgcattcc
ttaatcacaaatgcaggactactgctatctctcagggaagatgagaatttgcagagggtc
acaattctgtgtgtcttttgtgatcgtcctgattggcttgagatatggtcggagatcgag
ctcagggaaatgctagataagctgaaaccagtaatgcaggaggagaaaagctggaaatca
aggcttgaaggtacagttctgatgtctgggtcagaagattacagatctcctgcagtttct
ggtgctgttatccaggctctatctttgctgattgacaggtcccggcctttgccaagcatt
gctcttagagcaaggtttgtgagattggctggagctccgcttgtgcgggaatttcttgat
tgcttgcttcgcaggtgccaggaagcggagggtctcactgctttggctgatgatgatgct
atactcagggtttcccaatccatcaatgcagctcgatatgccgaatctatattgacagaa
tggtgcgaggatgtattctttctcgaaatggaagctgtatccgatgaggatactggtgga
ggatgtatttttgaggacgagatgggcggtttgaaagagttcagaacagaatgggttgag
aaaatctcaactgtcattctaagaggatttgatgcgcgctgccgggactattttaaaaat
aagaagcagtggcaggagaagacagaaggattggctgtatccaggacctttattggtgct
ctggactatctcgaagggaagatctccaaacttgatcagagtttaaacccgatggacttt
gttgcagtgtggagaggtcttgctggtggcgtggatcaactgattttaagtggagttttc
atgagcaatgcaaagttccacaacggtggtgttgagagacttggtgttgacttggaggtc
ttgtttcgggtgtttgctgcatggtgtttgaggcctgaaggcttcttcccaaagctgtgc
gagggtctgaggctgttaaagatggaggagaggcagctcaaggatgagatgtcaagggca
aaggagagatggttgagggagaatggtattaggcatctaacattatcagaggcattaaaa
atagtgaagaatagggtctttgtgggatga
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