Phoenix dactylifera (date palm): 103720350
Help
Entry
103720350 CDS
T03274
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103720350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103720350
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103720350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
103720350
NCBI-ProteinID:
XP_008808235
UniProt:
A0A8B7CXF2
LinkDB
All DBs
Position
11:2863735..2870131
Genome browser
AA seq
211 aa
AA seq
DB search
MEDGERNGNGAGSGGNVVDIYPLSRYYFGSKDAIPEKDDSLADRIQRLKASYAAHGMRTC
VEGVLLVELFQHPHVLLLQVKNSFFKLPGGRLRPGESDIEGLKRKLSRKLSLDESCINDE
WQVDECIGIWWRSEFETLPFPYLPPNTRRPKECTKLFLVRLPRTRQFVVPKNLKLLAVPL
CQMHDNSKTYGPIISGIPHHLSKFSFNTIHD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggggagcgtaacggtaacggagcggggagcggcggcaacgtggtggacatc
taccctcttagccgttactacttcggctcgaaagacgcgatcccagagaaagacgactcc
ttggccgacaggatccagcggttgaaagccagctatgctgctcatgggatgaggacttgc
gtcgaaggggttcttctggtcgaattgtttcaacaccctcatgttttattgttgcaagtg
aaaaactcattctttaagcttcctggaggccgtctgagacctggtgaatcagatattgaa
ggattgaaacgcaagctatcaagaaagctctcccttgatgaaagctgcataaatgatgag
tggcaggtagacgaatgcataggaatttggtggaggtctgagttcgagactctaccattt
ccatatttgccacctaatacacgcagacctaaggaatgcacaaagcttttcttggttagg
ctgcctaggacccggcaatttgttgtaccgaaaaatttgaagctgcttgcagttccattg
tgccagatgcatgataattcgaagacatacggtcctataatctctggaattccgcaccac
ctatcgaaattctccttcaacaccatccatgattga
DBGET
integrated database retrieval system
